Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC24.04■■□□□ 1.44
Smc4Q8CG47 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Smc4Q8CG47 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Smc4Q8CG47 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Smc4Q8CG47 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Smc4Q8CG47 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Smc4Q8CG47 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
Smc4Q8CG47 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Smc4Q8CG47 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Smc4Q8CG47 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC24.03■■□□□ 1.44
Smc4Q8CG47 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC24.03■■□□□ 1.44
Smc4Q8CG47 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Smc4Q8CG47 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Smc4Q8CG47 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Smc4Q8CG47 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Smc4Q8CG47 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
Smc4Q8CG47 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Smc4Q8CG47 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Smc4Q8CG47 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Smc4Q8CG47 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Smc4Q8CG47 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC24.01■■□□□ 1.43
Smc4Q8CG47 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Smc4Q8CG47 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Smc4Q8CG47 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Smc4Q8CG47 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Smc4Q8CG47 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Smc4Q8CG47 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Smc4Q8CG47 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
Smc4Q8CG47 Gm6802-201ENSMUST00000167843 1983 ntBASIC24■■□□□ 1.43
Smc4Q8CG47 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Smc4Q8CG47 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Smc4Q8CG47 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC24■■□□□ 1.43
Smc4Q8CG47 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC24■■□□□ 1.43
Smc4Q8CG47 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC24■■□□□ 1.43
Smc4Q8CG47 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Smc4Q8CG47 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC24■■□□□ 1.43
Smc4Q8CG47 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Smc4Q8CG47 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Smc4Q8CG47 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC23.99■■□□□ 1.43
Smc4Q8CG47 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC23.99■■□□□ 1.43
Smc4Q8CG47 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Smc4Q8CG47 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Smc4Q8CG47 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC23.99■■□□□ 1.43
Smc4Q8CG47 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Smc4Q8CG47 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Smc4Q8CG47 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Smc4Q8CG47 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Smc4Q8CG47 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Smc4Q8CG47 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC23.98■■□□□ 1.43
Smc4Q8CG47 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Smc4Q8CG47 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC23.98■■□□□ 1.43
Smc4Q8CG47 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Smc4Q8CG47 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Smc4Q8CG47 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Smc4Q8CG47 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Smc4Q8CG47 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Smc4Q8CG47 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Smc4Q8CG47 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC23.98■■□□□ 1.43
Smc4Q8CG47 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC23.97■■□□□ 1.43
Smc4Q8CG47 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC23.97■■□□□ 1.43
Smc4Q8CG47 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
Smc4Q8CG47 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Smc4Q8CG47 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Smc4Q8CG47 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Smc4Q8CG47 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Smc4Q8CG47 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Smc4Q8CG47 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Smc4Q8CG47 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Smc4Q8CG47 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Smc4Q8CG47 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Smc4Q8CG47 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Smc4Q8CG47 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC23.96■■□□□ 1.43
Smc4Q8CG47 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Smc4Q8CG47 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Smc4Q8CG47 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Smc4Q8CG47 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Smc4Q8CG47 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
Smc4Q8CG47 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Smc4Q8CG47 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.42
Smc4Q8CG47 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Smc4Q8CG47 CT030146.1-201ENSMUST00000220919 217 ntBASIC23.95■■□□□ 1.42
Smc4Q8CG47 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Smc4Q8CG47 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
Smc4Q8CG47 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
Smc4Q8CG47 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Smc4Q8CG47 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Smc4Q8CG47 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Smc4Q8CG47 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Smc4Q8CG47 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Smc4Q8CG47 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
Smc4Q8CG47 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Smc4Q8CG47 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC23.94■■□□□ 1.42
Smc4Q8CG47 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Smc4Q8CG47 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Smc4Q8CG47 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Smc4Q8CG47 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC23.94■■□□□ 1.42
Smc4Q8CG47 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Smc4Q8CG47 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC23.94■■□□□ 1.42
Smc4Q8CG47 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Smc4Q8CG47 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms