Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC24.28■■□□□ 1.48
Trim52Q8CDV4 AC112142.1-201ENSMUST00000228796 918 ntBASIC24.28■■□□□ 1.48
Trim52Q8CDV4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Trim52Q8CDV4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
Trim52Q8CDV4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC24.28■■□□□ 1.48
Trim52Q8CDV4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Trim52Q8CDV4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim52Q8CDV4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim52Q8CDV4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim52Q8CDV4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Trim52Q8CDV4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim52Q8CDV4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Trim52Q8CDV4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC24.27■■□□□ 1.48
Trim52Q8CDV4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim52Q8CDV4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim52Q8CDV4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim52Q8CDV4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim52Q8CDV4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim52Q8CDV4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC24.26■■□□□ 1.47
Trim52Q8CDV4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
Trim52Q8CDV4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC24.26■■□□□ 1.47
Trim52Q8CDV4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Trim52Q8CDV4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Trim52Q8CDV4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Trim52Q8CDV4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Trim52Q8CDV4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Trim52Q8CDV4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Trim52Q8CDV4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Trim52Q8CDV4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Trim52Q8CDV4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Trim52Q8CDV4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC24.24■■□□□ 1.47
Trim52Q8CDV4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Trim52Q8CDV4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Trim52Q8CDV4 Gm7860-201ENSMUST00000121190 879 ntBASIC24.24■■□□□ 1.47
Trim52Q8CDV4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Trim52Q8CDV4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Trim52Q8CDV4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
Trim52Q8CDV4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Trim52Q8CDV4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC24.23■■□□□ 1.47
Trim52Q8CDV4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Trim52Q8CDV4 Gm6420-201ENSMUST00000193885 723 ntBASIC24.23■■□□□ 1.47
Trim52Q8CDV4 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC24.23■■□□□ 1.47
Trim52Q8CDV4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Trim52Q8CDV4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Trim52Q8CDV4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Trim52Q8CDV4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Trim52Q8CDV4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Trim52Q8CDV4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Trim52Q8CDV4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
Trim52Q8CDV4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Trim52Q8CDV4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Trim52Q8CDV4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC24.22■■□□□ 1.47
Trim52Q8CDV4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Trim52Q8CDV4 Gm13148-201ENSMUST00000118892 745 ntBASIC24.22■■□□□ 1.47
Trim52Q8CDV4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
Trim52Q8CDV4 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC24.22■■□□□ 1.47
Trim52Q8CDV4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Trim52Q8CDV4 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Trim52Q8CDV4 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC24.21■■□□□ 1.47
Trim52Q8CDV4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Trim52Q8CDV4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Trim52Q8CDV4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Trim52Q8CDV4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Trim52Q8CDV4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC24.2■■□□□ 1.46
Trim52Q8CDV4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Trim52Q8CDV4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Trim52Q8CDV4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Trim52Q8CDV4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC24.2■■□□□ 1.46
Trim52Q8CDV4 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Trim52Q8CDV4 Gm7290-201ENSMUST00000104990 617 ntBASIC24.19■■□□□ 1.46
Trim52Q8CDV4 Gm12918-201ENSMUST00000120234 636 ntBASIC24.19■■□□□ 1.46
Trim52Q8CDV4 Gm15710-201ENSMUST00000121821 636 ntBASIC24.19■■□□□ 1.46
Trim52Q8CDV4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC24.19■■□□□ 1.46
Trim52Q8CDV4 Nespas-201ENSMUST00000143738 1083 ntBASIC24.19■■□□□ 1.46
Trim52Q8CDV4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
Trim52Q8CDV4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Trim52Q8CDV4 Gm5075-201ENSMUST00000196916 622 ntBASIC24.19■■□□□ 1.46
Trim52Q8CDV4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Trim52Q8CDV4 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Trim52Q8CDV4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC24.19■■□□□ 1.46
Trim52Q8CDV4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC24.19■■□□□ 1.46
Trim52Q8CDV4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Trim52Q8CDV4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC24.19■■□□□ 1.46
Trim52Q8CDV4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Trim52Q8CDV4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Trim52Q8CDV4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Trim52Q8CDV4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Trim52Q8CDV4 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Trim52Q8CDV4 Gm4968-201ENSMUST00000071458 858 ntBASIC24.18■■□□□ 1.46
Trim52Q8CDV4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Trim52Q8CDV4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Trim52Q8CDV4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC24.17■■□□□ 1.46
Trim52Q8CDV4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Trim52Q8CDV4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC24.17■■□□□ 1.46
Trim52Q8CDV4 Gm12441-201ENSMUST00000121806 588 ntBASIC24.17■■□□□ 1.46
Trim52Q8CDV4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Trim52Q8CDV4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC24.17■■□□□ 1.46
Trim52Q8CDV4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Trim52Q8CDV4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Trim52Q8CDV4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms