Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vcpip1Q8CDG3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vcpip1Q8CDG3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vcpip1Q8CDG3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.89■□□□□ 0.93
Vcpip1Q8CDG3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vcpip1Q8CDG3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Vcpip1Q8CDG3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vcpip1Q8CDG3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vcpip1Q8CDG3 Gm12922-201ENSMUST00000120626 809 ntBASIC20.88■□□□□ 0.93
Vcpip1Q8CDG3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vcpip1Q8CDG3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vcpip1Q8CDG3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vcpip1Q8CDG3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vcpip1Q8CDG3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.87■□□□□ 0.93
Vcpip1Q8CDG3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vcpip1Q8CDG3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vcpip1Q8CDG3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Vcpip1Q8CDG3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Vcpip1Q8CDG3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vcpip1Q8CDG3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.86■□□□□ 0.93
Vcpip1Q8CDG3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vcpip1Q8CDG3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vcpip1Q8CDG3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vcpip1Q8CDG3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vcpip1Q8CDG3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Vcpip1Q8CDG3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Vcpip1Q8CDG3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Vcpip1Q8CDG3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vcpip1Q8CDG3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vcpip1Q8CDG3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vcpip1Q8CDG3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vcpip1Q8CDG3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vcpip1Q8CDG3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.85■□□□□ 0.93
Vcpip1Q8CDG3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.85■□□□□ 0.93
Vcpip1Q8CDG3 Golgb1-201ENSMUST00000023534 498 ntBASIC20.85■□□□□ 0.93
Vcpip1Q8CDG3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.85■□□□□ 0.93
Vcpip1Q8CDG3 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.85■□□□□ 0.93
Vcpip1Q8CDG3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.85■□□□□ 0.93
Vcpip1Q8CDG3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Vcpip1Q8CDG3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vcpip1Q8CDG3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.84■□□□□ 0.93
Vcpip1Q8CDG3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Vcpip1Q8CDG3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vcpip1Q8CDG3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Vcpip1Q8CDG3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vcpip1Q8CDG3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vcpip1Q8CDG3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Vcpip1Q8CDG3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vcpip1Q8CDG3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vcpip1Q8CDG3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vcpip1Q8CDG3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Vcpip1Q8CDG3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vcpip1Q8CDG3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.83■□□□□ 0.93
Vcpip1Q8CDG3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vcpip1Q8CDG3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vcpip1Q8CDG3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vcpip1Q8CDG3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vcpip1Q8CDG3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Vcpip1Q8CDG3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.83■□□□□ 0.93
Vcpip1Q8CDG3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vcpip1Q8CDG3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Vcpip1Q8CDG3 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Vcpip1Q8CDG3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Vcpip1Q8CDG3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vcpip1Q8CDG3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vcpip1Q8CDG3 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.82■□□□□ 0.92
Vcpip1Q8CDG3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vcpip1Q8CDG3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.82■□□□□ 0.92
Vcpip1Q8CDG3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Vcpip1Q8CDG3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vcpip1Q8CDG3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Vcpip1Q8CDG3 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.81■□□□□ 0.92
Vcpip1Q8CDG3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Vcpip1Q8CDG3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.81■□□□□ 0.92
Vcpip1Q8CDG3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Vcpip1Q8CDG3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Vcpip1Q8CDG3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vcpip1Q8CDG3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vcpip1Q8CDG3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.81■□□□□ 0.92
Vcpip1Q8CDG3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Vcpip1Q8CDG3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vcpip1Q8CDG3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vcpip1Q8CDG3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vcpip1Q8CDG3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Vcpip1Q8CDG3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Vcpip1Q8CDG3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.8■□□□□ 0.92
Vcpip1Q8CDG3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vcpip1Q8CDG3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vcpip1Q8CDG3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Vcpip1Q8CDG3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Vcpip1Q8CDG3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.79■□□□□ 0.92
Vcpip1Q8CDG3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vcpip1Q8CDG3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vcpip1Q8CDG3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vcpip1Q8CDG3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Vcpip1Q8CDG3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.78■□□□□ 0.92
Vcpip1Q8CDG3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vcpip1Q8CDG3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vcpip1Q8CDG3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Vcpip1Q8CDG3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms