Protein–RNA interactions for Protein: Q8C9F4

Gm9949, Predicted gene 9949, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9949Q8C9F4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Gm9949Q8C9F4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Gm9949Q8C9F4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm9949Q8C9F4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Gm9949Q8C9F4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Gm9949Q8C9F4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm9949Q8C9F4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm9949Q8C9F4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.35■□□□□ 0.05
Gm9949Q8C9F4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Gm9949Q8C9F4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Gm9949Q8C9F4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm9949Q8C9F4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Gm9949Q8C9F4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm9949Q8C9F4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.34■□□□□ 0.05
Gm9949Q8C9F4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm9949Q8C9F4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm9949Q8C9F4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm9949Q8C9F4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm9949Q8C9F4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm9949Q8C9F4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm9949Q8C9F4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Gm9949Q8C9F4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.34■□□□□ 0.05
Gm9949Q8C9F4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC15.34■□□□□ 0.05
Gm9949Q8C9F4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Gm9949Q8C9F4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm9949Q8C9F4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm9949Q8C9F4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gm9949Q8C9F4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gm9949Q8C9F4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm9949Q8C9F4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm9949Q8C9F4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm9949Q8C9F4 Mir7075-201ENSMUST00000184187 82 ntBASIC15.33■□□□□ 0.04
Gm9949Q8C9F4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.33■□□□□ 0.04
Gm9949Q8C9F4 Gm45417-201ENSMUST00000209533 758 ntBASIC15.33■□□□□ 0.04
Gm9949Q8C9F4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Gm9949Q8C9F4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.33■□□□□ 0.04
Gm9949Q8C9F4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gm9949Q8C9F4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm9949Q8C9F4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm9949Q8C9F4 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm9949Q8C9F4 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.32■□□□□ 0.04
Gm9949Q8C9F4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm9949Q8C9F4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm9949Q8C9F4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm9949Q8C9F4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Gm9949Q8C9F4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm9949Q8C9F4 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.32■□□□□ 0.04
Gm9949Q8C9F4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm9949Q8C9F4 Serp2-204ENSMUST00000228055 705 ntBASIC15.32■□□□□ 0.04
Gm9949Q8C9F4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Gm9949Q8C9F4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Gm9949Q8C9F4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm9949Q8C9F4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm9949Q8C9F4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm9949Q8C9F4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm9949Q8C9F4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm9949Q8C9F4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm9949Q8C9F4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm9949Q8C9F4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm9949Q8C9F4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm9949Q8C9F4 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm9949Q8C9F4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm9949Q8C9F4 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.31■□□□□ 0.04
Gm9949Q8C9F4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm9949Q8C9F4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm9949Q8C9F4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm9949Q8C9F4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Gm9949Q8C9F4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm9949Q8C9F4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm9949Q8C9F4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.3■□□□□ 0.04
Gm9949Q8C9F4 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC15.3■□□□□ 0.04
Gm9949Q8C9F4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm9949Q8C9F4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.3■□□□□ 0.04
Gm9949Q8C9F4 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.3■□□□□ 0.04
Gm9949Q8C9F4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm9949Q8C9F4 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm9949Q8C9F4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm9949Q8C9F4 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.3■□□□□ 0.04
Gm9949Q8C9F4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm9949Q8C9F4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm9949Q8C9F4 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm9949Q8C9F4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm9949Q8C9F4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm9949Q8C9F4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm9949Q8C9F4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.29■□□□□ 0.04
Gm9949Q8C9F4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.29■□□□□ 0.04
Gm9949Q8C9F4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm9949Q8C9F4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm9949Q8C9F4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm9949Q8C9F4 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm9949Q8C9F4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Gm9949Q8C9F4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC15.29■□□□□ 0.04
Gm9949Q8C9F4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm9949Q8C9F4 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm9949Q8C9F4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm9949Q8C9F4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm9949Q8C9F4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm9949Q8C9F4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Gm9949Q8C9F4 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm9949Q8C9F4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms