Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC22.42■■□□□ 1.18
Rtp1Q8C8C1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Rtp1Q8C8C1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Rtp1Q8C8C1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rtp1Q8C8C1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Rtp1Q8C8C1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rtp1Q8C8C1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rtp1Q8C8C1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Rtp1Q8C8C1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rtp1Q8C8C1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rtp1Q8C8C1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.4■■□□□ 1.18
Rtp1Q8C8C1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rtp1Q8C8C1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC22.4■■□□□ 1.18
Rtp1Q8C8C1 Gm38205-201ENSMUST00000192243 258 ntBASIC22.4■■□□□ 1.18
Rtp1Q8C8C1 CT030146.1-201ENSMUST00000220919 217 ntBASIC22.4■■□□□ 1.18
Rtp1Q8C8C1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rtp1Q8C8C1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rtp1Q8C8C1 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rtp1Q8C8C1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Rtp1Q8C8C1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Rtp1Q8C8C1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rtp1Q8C8C1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC22.39■■□□□ 1.17
Rtp1Q8C8C1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Rtp1Q8C8C1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Rtp1Q8C8C1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rtp1Q8C8C1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Rtp1Q8C8C1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rtp1Q8C8C1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rtp1Q8C8C1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rtp1Q8C8C1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC22.39■■□□□ 1.17
Rtp1Q8C8C1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rtp1Q8C8C1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rtp1Q8C8C1 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Rtp1Q8C8C1 Gm44672-201ENSMUST00000206944 1098 ntBASIC22.38■■□□□ 1.17
Rtp1Q8C8C1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
Rtp1Q8C8C1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC22.38■■□□□ 1.17
Rtp1Q8C8C1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Rtp1Q8C8C1 Gm10655-201ENSMUST00000098658 1397 ntBASIC22.38■■□□□ 1.17
Rtp1Q8C8C1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rtp1Q8C8C1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Rtp1Q8C8C1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rtp1Q8C8C1 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rtp1Q8C8C1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Rtp1Q8C8C1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rtp1Q8C8C1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC22.37■■□□□ 1.17
Rtp1Q8C8C1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Rtp1Q8C8C1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rtp1Q8C8C1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC22.37■■□□□ 1.17
Rtp1Q8C8C1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
Rtp1Q8C8C1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC22.37■■□□□ 1.17
Rtp1Q8C8C1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rtp1Q8C8C1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rtp1Q8C8C1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Rtp1Q8C8C1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Rtp1Q8C8C1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rtp1Q8C8C1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Rtp1Q8C8C1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Rtp1Q8C8C1 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC22.36■■□□□ 1.17
Rtp1Q8C8C1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rtp1Q8C8C1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rtp1Q8C8C1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Rtp1Q8C8C1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rtp1Q8C8C1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rtp1Q8C8C1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rtp1Q8C8C1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rtp1Q8C8C1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rtp1Q8C8C1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC22.35■■□□□ 1.17
Rtp1Q8C8C1 Gm29994-201ENSMUST00000195495 1193 ntBASIC22.35■■□□□ 1.17
Rtp1Q8C8C1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rtp1Q8C8C1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rtp1Q8C8C1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Rtp1Q8C8C1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rtp1Q8C8C1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Rtp1Q8C8C1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rtp1Q8C8C1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rtp1Q8C8C1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rtp1Q8C8C1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.34■■□□□ 1.17
Rtp1Q8C8C1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rtp1Q8C8C1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rtp1Q8C8C1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rtp1Q8C8C1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC22.33■■□□□ 1.17
Rtp1Q8C8C1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rtp1Q8C8C1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rtp1Q8C8C1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Rtp1Q8C8C1 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rtp1Q8C8C1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Rtp1Q8C8C1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rtp1Q8C8C1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
Rtp1Q8C8C1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Rtp1Q8C8C1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.16
Rtp1Q8C8C1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rtp1Q8C8C1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rtp1Q8C8C1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Rtp1Q8C8C1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Rtp1Q8C8C1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Rtp1Q8C8C1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC22.32■■□□□ 1.16
Rtp1Q8C8C1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
Rtp1Q8C8C1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Rtp1Q8C8C1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rtp1Q8C8C1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC22.32■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms