Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Aph1bQ8C7N7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Aph1bQ8C7N7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Aph1bQ8C7N7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.3■□□□□ 0.68
Aph1bQ8C7N7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Aph1bQ8C7N7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Aph1bQ8C7N7 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Aph1bQ8C7N7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Aph1bQ8C7N7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Aph1bQ8C7N7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.29■□□□□ 0.68
Aph1bQ8C7N7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
Aph1bQ8C7N7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.29■□□□□ 0.68
Aph1bQ8C7N7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Aph1bQ8C7N7 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.29■□□□□ 0.68
Aph1bQ8C7N7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Aph1bQ8C7N7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Aph1bQ8C7N7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Aph1bQ8C7N7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Aph1bQ8C7N7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.28■□□□□ 0.68
Aph1bQ8C7N7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.28■□□□□ 0.68
Aph1bQ8C7N7 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.28■□□□□ 0.68
Aph1bQ8C7N7 Golgb1-201ENSMUST00000023534 498 ntBASIC19.28■□□□□ 0.68
Aph1bQ8C7N7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.28■□□□□ 0.68
Aph1bQ8C7N7 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Aph1bQ8C7N7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Aph1bQ8C7N7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Aph1bQ8C7N7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Aph1bQ8C7N7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.28■□□□□ 0.68
Aph1bQ8C7N7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Aph1bQ8C7N7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Aph1bQ8C7N7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Aph1bQ8C7N7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Aph1bQ8C7N7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Aph1bQ8C7N7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Aph1bQ8C7N7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Aph1bQ8C7N7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Aph1bQ8C7N7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Aph1bQ8C7N7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.27■□□□□ 0.67
Aph1bQ8C7N7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Aph1bQ8C7N7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Aph1bQ8C7N7 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.26■□□□□ 0.67
Aph1bQ8C7N7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Aph1bQ8C7N7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Aph1bQ8C7N7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Aph1bQ8C7N7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Aph1bQ8C7N7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Aph1bQ8C7N7 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.26■□□□□ 0.67
Aph1bQ8C7N7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Aph1bQ8C7N7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Aph1bQ8C7N7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Aph1bQ8C7N7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Aph1bQ8C7N7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Aph1bQ8C7N7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.25■□□□□ 0.67
Aph1bQ8C7N7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Aph1bQ8C7N7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Aph1bQ8C7N7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Aph1bQ8C7N7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Aph1bQ8C7N7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.25■□□□□ 0.67
Aph1bQ8C7N7 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.25■□□□□ 0.67
Aph1bQ8C7N7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Aph1bQ8C7N7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Aph1bQ8C7N7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
Aph1bQ8C7N7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Aph1bQ8C7N7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Aph1bQ8C7N7 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Aph1bQ8C7N7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Aph1bQ8C7N7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Aph1bQ8C7N7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Aph1bQ8C7N7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Aph1bQ8C7N7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Aph1bQ8C7N7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Aph1bQ8C7N7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.24■□□□□ 0.67
Aph1bQ8C7N7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.24■□□□□ 0.67
Aph1bQ8C7N7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.24■□□□□ 0.67
Aph1bQ8C7N7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Aph1bQ8C7N7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Aph1bQ8C7N7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Aph1bQ8C7N7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Aph1bQ8C7N7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Aph1bQ8C7N7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Aph1bQ8C7N7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Aph1bQ8C7N7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Aph1bQ8C7N7 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.23■□□□□ 0.67
Aph1bQ8C7N7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.23■□□□□ 0.67
Aph1bQ8C7N7 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.23■□□□□ 0.67
Aph1bQ8C7N7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Aph1bQ8C7N7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Aph1bQ8C7N7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Aph1bQ8C7N7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Aph1bQ8C7N7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Aph1bQ8C7N7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Aph1bQ8C7N7 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Aph1bQ8C7N7 Serp2-204ENSMUST00000228055 705 ntBASIC19.22■□□□□ 0.67
Aph1bQ8C7N7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Aph1bQ8C7N7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Aph1bQ8C7N7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Aph1bQ8C7N7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Aph1bQ8C7N7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Aph1bQ8C7N7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Aph1bQ8C7N7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 101.7 ms