Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rft1Q8C3B8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rft1Q8C3B8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rft1Q8C3B8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rft1Q8C3B8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rft1Q8C3B8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rft1Q8C3B8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rft1Q8C3B8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
Rft1Q8C3B8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rft1Q8C3B8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.26■□□□□ 0.35
Rft1Q8C3B8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rft1Q8C3B8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rft1Q8C3B8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rft1Q8C3B8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rft1Q8C3B8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rft1Q8C3B8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rft1Q8C3B8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rft1Q8C3B8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rft1Q8C3B8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rft1Q8C3B8 Gm12922-201ENSMUST00000120626 809 ntBASIC17.25■□□□□ 0.35
Rft1Q8C3B8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.25■□□□□ 0.35
Rft1Q8C3B8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.25■□□□□ 0.35
Rft1Q8C3B8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rft1Q8C3B8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Rft1Q8C3B8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.25■□□□□ 0.35
Rft1Q8C3B8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rft1Q8C3B8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rft1Q8C3B8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.24■□□□□ 0.35
Rft1Q8C3B8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Rft1Q8C3B8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rft1Q8C3B8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rft1Q8C3B8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rft1Q8C3B8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rft1Q8C3B8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rft1Q8C3B8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rft1Q8C3B8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rft1Q8C3B8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rft1Q8C3B8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rft1Q8C3B8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rft1Q8C3B8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rft1Q8C3B8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rft1Q8C3B8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rft1Q8C3B8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rft1Q8C3B8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.23■□□□□ 0.35
Rft1Q8C3B8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rft1Q8C3B8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.23■□□□□ 0.35
Rft1Q8C3B8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Rft1Q8C3B8 Gm13241-201ENSMUST00000094493 780 ntBASIC17.23■□□□□ 0.35
Rft1Q8C3B8 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.23■□□□□ 0.35
Rft1Q8C3B8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rft1Q8C3B8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rft1Q8C3B8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rft1Q8C3B8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rft1Q8C3B8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rft1Q8C3B8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rft1Q8C3B8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.22■□□□□ 0.35
Rft1Q8C3B8 Gm9870-201ENSMUST00000063874 645 ntBASIC17.22■□□□□ 0.35
Rft1Q8C3B8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
Rft1Q8C3B8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rft1Q8C3B8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rft1Q8C3B8 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rft1Q8C3B8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.22■□□□□ 0.35
Rft1Q8C3B8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rft1Q8C3B8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rft1Q8C3B8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
Rft1Q8C3B8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rft1Q8C3B8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Rft1Q8C3B8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rft1Q8C3B8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rft1Q8C3B8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rft1Q8C3B8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Rft1Q8C3B8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Rft1Q8C3B8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rft1Q8C3B8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rft1Q8C3B8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.21■□□□□ 0.35
Rft1Q8C3B8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rft1Q8C3B8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.21■□□□□ 0.35
Rft1Q8C3B8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rft1Q8C3B8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.21■□□□□ 0.34
Rft1Q8C3B8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rft1Q8C3B8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rft1Q8C3B8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rft1Q8C3B8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rft1Q8C3B8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.2■□□□□ 0.34
Rft1Q8C3B8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rft1Q8C3B8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.2■□□□□ 0.34
Rft1Q8C3B8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Rft1Q8C3B8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rft1Q8C3B8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rft1Q8C3B8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rft1Q8C3B8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rft1Q8C3B8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rft1Q8C3B8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rft1Q8C3B8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Rft1Q8C3B8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rft1Q8C3B8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Rft1Q8C3B8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.19■□□□□ 0.34
Rft1Q8C3B8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.19■□□□□ 0.34
Rft1Q8C3B8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rft1Q8C3B8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms