Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Trub1Q8C0D0 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Trub1Q8C0D0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Trub1Q8C0D0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trub1Q8C0D0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.1■□□□□ 0.81
Trub1Q8C0D0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trub1Q8C0D0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.1■□□□□ 0.81
Trub1Q8C0D0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trub1Q8C0D0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trub1Q8C0D0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trub1Q8C0D0 Gm12821-201ENSMUST00000120022 600 ntBASIC20.09■□□□□ 0.81
Trub1Q8C0D0 Mir7075-201ENSMUST00000184187 82 ntBASIC20.09■□□□□ 0.81
Trub1Q8C0D0 Gm27454-201ENSMUST00000185090 204 ntBASIC20.09■□□□□ 0.81
Trub1Q8C0D0 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trub1Q8C0D0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Trub1Q8C0D0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trub1Q8C0D0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trub1Q8C0D0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trub1Q8C0D0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trub1Q8C0D0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trub1Q8C0D0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.08■□□□□ 0.81
Trub1Q8C0D0 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.08■□□□□ 0.81
Trub1Q8C0D0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.08■□□□□ 0.81
Trub1Q8C0D0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trub1Q8C0D0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trub1Q8C0D0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trub1Q8C0D0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Trub1Q8C0D0 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trub1Q8C0D0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Trub1Q8C0D0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trub1Q8C0D0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trub1Q8C0D0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trub1Q8C0D0 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trub1Q8C0D0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.07■□□□□ 0.8
Trub1Q8C0D0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trub1Q8C0D0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trub1Q8C0D0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trub1Q8C0D0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trub1Q8C0D0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Trub1Q8C0D0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trub1Q8C0D0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trub1Q8C0D0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trub1Q8C0D0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trub1Q8C0D0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trub1Q8C0D0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trub1Q8C0D0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trub1Q8C0D0 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.06■□□□□ 0.8
Trub1Q8C0D0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trub1Q8C0D0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trub1Q8C0D0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trub1Q8C0D0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trub1Q8C0D0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trub1Q8C0D0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trub1Q8C0D0 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trub1Q8C0D0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trub1Q8C0D0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Trub1Q8C0D0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trub1Q8C0D0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trub1Q8C0D0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.05■□□□□ 0.8
Trub1Q8C0D0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trub1Q8C0D0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trub1Q8C0D0 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.05■□□□□ 0.8
Trub1Q8C0D0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trub1Q8C0D0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trub1Q8C0D0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.05■□□□□ 0.8
Trub1Q8C0D0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.05■□□□□ 0.8
Trub1Q8C0D0 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trub1Q8C0D0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trub1Q8C0D0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trub1Q8C0D0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trub1Q8C0D0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trub1Q8C0D0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trub1Q8C0D0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trub1Q8C0D0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.04■□□□□ 0.8
Trub1Q8C0D0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trub1Q8C0D0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trub1Q8C0D0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trub1Q8C0D0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trub1Q8C0D0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Trub1Q8C0D0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.03■□□□□ 0.8
Trub1Q8C0D0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trub1Q8C0D0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trub1Q8C0D0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trub1Q8C0D0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trub1Q8C0D0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trub1Q8C0D0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Trub1Q8C0D0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trub1Q8C0D0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trub1Q8C0D0 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Trub1Q8C0D0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trub1Q8C0D0 Gm8493-201ENSMUST00000196881 489 ntBASIC20.02■□□□□ 0.8
Trub1Q8C0D0 Gm43173-201ENSMUST00000202246 593 ntBASIC20.02■□□□□ 0.8
Trub1Q8C0D0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trub1Q8C0D0 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.02■□□□□ 0.8
Trub1Q8C0D0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trub1Q8C0D0 Iqck-206ENSMUST00000208658 2891 ntBASIC20.02■□□□□ 0.8
Trub1Q8C0D0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trub1Q8C0D0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trub1Q8C0D0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trub1Q8C0D0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms