Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdk5rap1Q8BTW8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cdk5rap1Q8BTW8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Cdk5rap1Q8BTW8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.49■□□□□ 0.55
Cdk5rap1Q8BTW8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.48■□□□□ 0.55
Cdk5rap1Q8BTW8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdk5rap1Q8BTW8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.48■□□□□ 0.55
Cdk5rap1Q8BTW8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Cdk5rap1Q8BTW8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cdk5rap1Q8BTW8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.48■□□□□ 0.55
Cdk5rap1Q8BTW8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Cdk5rap1Q8BTW8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdk5rap1Q8BTW8 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Cdk5rap1Q8BTW8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdk5rap1Q8BTW8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdk5rap1Q8BTW8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cdk5rap1Q8BTW8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cdk5rap1Q8BTW8 Gm13234-201ENSMUST00000120010 747 ntBASIC18.47■□□□□ 0.55
Cdk5rap1Q8BTW8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.47■□□□□ 0.55
Cdk5rap1Q8BTW8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdk5rap1Q8BTW8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdk5rap1Q8BTW8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cdk5rap1Q8BTW8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cdk5rap1Q8BTW8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdk5rap1Q8BTW8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdk5rap1Q8BTW8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdk5rap1Q8BTW8 Reep4-203ENSMUST00000226563 1444 ntBASIC18.47■□□□□ 0.55
Cdk5rap1Q8BTW8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdk5rap1Q8BTW8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdk5rap1Q8BTW8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdk5rap1Q8BTW8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdk5rap1Q8BTW8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cdk5rap1Q8BTW8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdk5rap1Q8BTW8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdk5rap1Q8BTW8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdk5rap1Q8BTW8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdk5rap1Q8BTW8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
Cdk5rap1Q8BTW8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cdk5rap1Q8BTW8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdk5rap1Q8BTW8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdk5rap1Q8BTW8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdk5rap1Q8BTW8 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.46■□□□□ 0.55
Cdk5rap1Q8BTW8 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
Cdk5rap1Q8BTW8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Cdk5rap1Q8BTW8 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdk5rap1Q8BTW8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.45■□□□□ 0.54
Cdk5rap1Q8BTW8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.45■□□□□ 0.54
Cdk5rap1Q8BTW8 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.45■□□□□ 0.54
Cdk5rap1Q8BTW8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cdk5rap1Q8BTW8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.44■□□□□ 0.54
Cdk5rap1Q8BTW8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cdk5rap1Q8BTW8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdk5rap1Q8BTW8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Cdk5rap1Q8BTW8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdk5rap1Q8BTW8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cdk5rap1Q8BTW8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.44■□□□□ 0.54
Cdk5rap1Q8BTW8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.44■□□□□ 0.54
Cdk5rap1Q8BTW8 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdk5rap1Q8BTW8 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdk5rap1Q8BTW8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Cdk5rap1Q8BTW8 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cdk5rap1Q8BTW8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdk5rap1Q8BTW8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cdk5rap1Q8BTW8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Cdk5rap1Q8BTW8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.43■□□□□ 0.54
Cdk5rap1Q8BTW8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.43■□□□□ 0.54
Cdk5rap1Q8BTW8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cdk5rap1Q8BTW8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.43■□□□□ 0.54
Cdk5rap1Q8BTW8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.43■□□□□ 0.54
Cdk5rap1Q8BTW8 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.43■□□□□ 0.54
Cdk5rap1Q8BTW8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdk5rap1Q8BTW8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdk5rap1Q8BTW8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Cdk5rap1Q8BTW8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdk5rap1Q8BTW8 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.42■□□□□ 0.54
Cdk5rap1Q8BTW8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.42■□□□□ 0.54
Cdk5rap1Q8BTW8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdk5rap1Q8BTW8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdk5rap1Q8BTW8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdk5rap1Q8BTW8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.41■□□□□ 0.54
Cdk5rap1Q8BTW8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdk5rap1Q8BTW8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.41■□□□□ 0.54
Cdk5rap1Q8BTW8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cdk5rap1Q8BTW8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdk5rap1Q8BTW8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.41■□□□□ 0.54
Cdk5rap1Q8BTW8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Cdk5rap1Q8BTW8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.41■□□□□ 0.54
Cdk5rap1Q8BTW8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Cdk5rap1Q8BTW8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdk5rap1Q8BTW8 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cdk5rap1Q8BTW8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.41■□□□□ 0.54
Cdk5rap1Q8BTW8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdk5rap1Q8BTW8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdk5rap1Q8BTW8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdk5rap1Q8BTW8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdk5rap1Q8BTW8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdk5rap1Q8BTW8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdk5rap1Q8BTW8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.4■□□□□ 0.54
Cdk5rap1Q8BTW8 Gm37179-201ENSMUST00000194862 823 ntBASIC18.4■□□□□ 0.54
Cdk5rap1Q8BTW8 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms