Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sfr1Q8BP27 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Sfr1Q8BP27 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sfr1Q8BP27 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sfr1Q8BP27 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.72■□□□□ 0.75
Sfr1Q8BP27 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sfr1Q8BP27 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.72■□□□□ 0.75
Sfr1Q8BP27 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.72■□□□□ 0.75
Sfr1Q8BP27 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sfr1Q8BP27 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sfr1Q8BP27 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sfr1Q8BP27 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.72■□□□□ 0.75
Sfr1Q8BP27 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sfr1Q8BP27 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.72■□□□□ 0.75
Sfr1Q8BP27 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.71■□□□□ 0.75
Sfr1Q8BP27 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sfr1Q8BP27 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sfr1Q8BP27 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sfr1Q8BP27 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sfr1Q8BP27 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.71■□□□□ 0.75
Sfr1Q8BP27 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Sfr1Q8BP27 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sfr1Q8BP27 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sfr1Q8BP27 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.71■□□□□ 0.75
Sfr1Q8BP27 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sfr1Q8BP27 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Sfr1Q8BP27 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sfr1Q8BP27 Gm11421-201ENSMUST00000122124 294 ntBASIC19.7■□□□□ 0.74
Sfr1Q8BP27 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.7■□□□□ 0.74
Sfr1Q8BP27 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sfr1Q8BP27 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Sfr1Q8BP27 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.7■□□□□ 0.74
Sfr1Q8BP27 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sfr1Q8BP27 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sfr1Q8BP27 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sfr1Q8BP27 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sfr1Q8BP27 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sfr1Q8BP27 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Sfr1Q8BP27 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sfr1Q8BP27 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Sfr1Q8BP27 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sfr1Q8BP27 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sfr1Q8BP27 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sfr1Q8BP27 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Sfr1Q8BP27 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sfr1Q8BP27 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sfr1Q8BP27 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Sfr1Q8BP27 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sfr1Q8BP27 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sfr1Q8BP27 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sfr1Q8BP27 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sfr1Q8BP27 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sfr1Q8BP27 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sfr1Q8BP27 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sfr1Q8BP27 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
Sfr1Q8BP27 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sfr1Q8BP27 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sfr1Q8BP27 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sfr1Q8BP27 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sfr1Q8BP27 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sfr1Q8BP27 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.68■□□□□ 0.74
Sfr1Q8BP27 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sfr1Q8BP27 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Sfr1Q8BP27 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sfr1Q8BP27 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sfr1Q8BP27 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.68■□□□□ 0.74
Sfr1Q8BP27 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sfr1Q8BP27 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sfr1Q8BP27 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.67■□□□□ 0.74
Sfr1Q8BP27 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sfr1Q8BP27 Gm43060-201ENSMUST00000200621 289 ntBASIC19.67■□□□□ 0.74
Sfr1Q8BP27 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sfr1Q8BP27 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Sfr1Q8BP27 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.67■□□□□ 0.74
Sfr1Q8BP27 AA386476-201ENSMUST00000098781 1665 ntBASIC19.67■□□□□ 0.74
Sfr1Q8BP27 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.67■□□□□ 0.74
Sfr1Q8BP27 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.67■□□□□ 0.74
Sfr1Q8BP27 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sfr1Q8BP27 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sfr1Q8BP27 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Sfr1Q8BP27 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sfr1Q8BP27 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sfr1Q8BP27 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Sfr1Q8BP27 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Sfr1Q8BP27 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sfr1Q8BP27 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sfr1Q8BP27 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.65■□□□□ 0.74
Sfr1Q8BP27 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sfr1Q8BP27 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
Sfr1Q8BP27 Gm40848-201ENSMUST00000221998 324 ntBASIC19.65■□□□□ 0.74
Sfr1Q8BP27 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sfr1Q8BP27 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sfr1Q8BP27 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sfr1Q8BP27 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sfr1Q8BP27 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Sfr1Q8BP27 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sfr1Q8BP27 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sfr1Q8BP27 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sfr1Q8BP27 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sfr1Q8BP27 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms