Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smg1Q8BKX6 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smg1Q8BKX6 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.71■□□□□ 0.27
Smg1Q8BKX6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Smg1Q8BKX6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.71■□□□□ 0.27
Smg1Q8BKX6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Smg1Q8BKX6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Smg1Q8BKX6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Smg1Q8BKX6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Smg1Q8BKX6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
Smg1Q8BKX6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
Smg1Q8BKX6 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smg1Q8BKX6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smg1Q8BKX6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smg1Q8BKX6 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smg1Q8BKX6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.7■□□□□ 0.26
Smg1Q8BKX6 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.7■□□□□ 0.26
Smg1Q8BKX6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smg1Q8BKX6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smg1Q8BKX6 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.7■□□□□ 0.26
Smg1Q8BKX6 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smg1Q8BKX6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Smg1Q8BKX6 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Smg1Q8BKX6 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smg1Q8BKX6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smg1Q8BKX6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smg1Q8BKX6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.69■□□□□ 0.26
Smg1Q8BKX6 Gm6576-201ENSMUST00000169678 883 ntBASIC16.69■□□□□ 0.26
Smg1Q8BKX6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smg1Q8BKX6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Smg1Q8BKX6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smg1Q8BKX6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smg1Q8BKX6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smg1Q8BKX6 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smg1Q8BKX6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.69■□□□□ 0.26
Smg1Q8BKX6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smg1Q8BKX6 Gm11249-201ENSMUST00000117071 859 ntBASIC16.68■□□□□ 0.26
Smg1Q8BKX6 Gm6433-201ENSMUST00000118634 875 ntBASIC16.68■□□□□ 0.26
Smg1Q8BKX6 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.68■□□□□ 0.26
Smg1Q8BKX6 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smg1Q8BKX6 Dmtn-209ENSMUST00000228295 2572 ntBASIC16.68■□□□□ 0.26
Smg1Q8BKX6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smg1Q8BKX6 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smg1Q8BKX6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smg1Q8BKX6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smg1Q8BKX6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.68■□□□□ 0.26
Smg1Q8BKX6 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smg1Q8BKX6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smg1Q8BKX6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smg1Q8BKX6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smg1Q8BKX6 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smg1Q8BKX6 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.68■□□□□ 0.26
Smg1Q8BKX6 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smg1Q8BKX6 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.68■□□□□ 0.26
Smg1Q8BKX6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.67■□□□□ 0.26
Smg1Q8BKX6 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smg1Q8BKX6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smg1Q8BKX6 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smg1Q8BKX6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smg1Q8BKX6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Smg1Q8BKX6 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.67■□□□□ 0.26
Smg1Q8BKX6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.67■□□□□ 0.26
Smg1Q8BKX6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smg1Q8BKX6 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.67■□□□□ 0.26
Smg1Q8BKX6 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smg1Q8BKX6 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.67■□□□□ 0.26
Smg1Q8BKX6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.67■□□□□ 0.26
Smg1Q8BKX6 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smg1Q8BKX6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smg1Q8BKX6 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smg1Q8BKX6 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smg1Q8BKX6 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smg1Q8BKX6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.66■□□□□ 0.26
Smg1Q8BKX6 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.66■□□□□ 0.26
Smg1Q8BKX6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.66■□□□□ 0.26
Smg1Q8BKX6 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smg1Q8BKX6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smg1Q8BKX6 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smg1Q8BKX6 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.66■□□□□ 0.26
Smg1Q8BKX6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Smg1Q8BKX6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smg1Q8BKX6 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smg1Q8BKX6 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smg1Q8BKX6 Gm13146-201ENSMUST00000118508 780 ntBASIC16.65■□□□□ 0.26
Smg1Q8BKX6 Gm6211-202ENSMUST00000167849 925 ntBASIC16.65■□□□□ 0.26
Smg1Q8BKX6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smg1Q8BKX6 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Smg1Q8BKX6 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smg1Q8BKX6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.65■□□□□ 0.26
Smg1Q8BKX6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smg1Q8BKX6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smg1Q8BKX6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smg1Q8BKX6 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smg1Q8BKX6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smg1Q8BKX6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smg1Q8BKX6 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Smg1Q8BKX6 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.64■□□□□ 0.25
Smg1Q8BKX6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smg1Q8BKX6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smg1Q8BKX6 Gm21362-201ENSMUST00000194272 928 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms