Protein–RNA interactions for Protein: Q8BKD6

Rnf144b, E3 ubiquitin-protein ligase RNF144B, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf144bQ8BKD6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf144bQ8BKD6 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.52■□□□□ 0.24
Rnf144bQ8BKD6 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf144bQ8BKD6 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf144bQ8BKD6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf144bQ8BKD6 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf144bQ8BKD6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
Rnf144bQ8BKD6 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf144bQ8BKD6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf144bQ8BKD6 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf144bQ8BKD6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf144bQ8BKD6 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf144bQ8BKD6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.51■□□□□ 0.23
Rnf144bQ8BKD6 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf144bQ8BKD6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Rnf144bQ8BKD6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.51■□□□□ 0.23
Rnf144bQ8BKD6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.51■□□□□ 0.23
Rnf144bQ8BKD6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
Rnf144bQ8BKD6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Rnf144bQ8BKD6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf144bQ8BKD6 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf144bQ8BKD6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf144bQ8BKD6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf144bQ8BKD6 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf144bQ8BKD6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf144bQ8BKD6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf144bQ8BKD6 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf144bQ8BKD6 Gm12922-201ENSMUST00000120626 809 ntBASIC16.5■□□□□ 0.23
Rnf144bQ8BKD6 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf144bQ8BKD6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf144bQ8BKD6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf144bQ8BKD6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf144bQ8BKD6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf144bQ8BKD6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf144bQ8BKD6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf144bQ8BKD6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf144bQ8BKD6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf144bQ8BKD6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf144bQ8BKD6 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Rnf144bQ8BKD6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf144bQ8BKD6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf144bQ8BKD6 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.49■□□□□ 0.23
Rnf144bQ8BKD6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf144bQ8BKD6 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Rnf144bQ8BKD6 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf144bQ8BKD6 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf144bQ8BKD6 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf144bQ8BKD6 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.49■□□□□ 0.23
Rnf144bQ8BKD6 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.49■□□□□ 0.23
Rnf144bQ8BKD6 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf144bQ8BKD6 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf144bQ8BKD6 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf144bQ8BKD6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf144bQ8BKD6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Rnf144bQ8BKD6 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf144bQ8BKD6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Rnf144bQ8BKD6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf144bQ8BKD6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf144bQ8BKD6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf144bQ8BKD6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf144bQ8BKD6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Rnf144bQ8BKD6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.48■□□□□ 0.23
Rnf144bQ8BKD6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf144bQ8BKD6 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.48■□□□□ 0.23
Rnf144bQ8BKD6 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf144bQ8BKD6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf144bQ8BKD6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf144bQ8BKD6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf144bQ8BKD6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf144bQ8BKD6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf144bQ8BKD6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf144bQ8BKD6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.47■□□□□ 0.23
Rnf144bQ8BKD6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf144bQ8BKD6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf144bQ8BKD6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf144bQ8BKD6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf144bQ8BKD6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.47■□□□□ 0.23
Rnf144bQ8BKD6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf144bQ8BKD6 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.47■□□□□ 0.23
Rnf144bQ8BKD6 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.47■□□□□ 0.23
Rnf144bQ8BKD6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.47■□□□□ 0.23
Rnf144bQ8BKD6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf144bQ8BKD6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf144bQ8BKD6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Rnf144bQ8BKD6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.46■□□□□ 0.23
Rnf144bQ8BKD6 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf144bQ8BKD6 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf144bQ8BKD6 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf144bQ8BKD6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf144bQ8BKD6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf144bQ8BKD6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf144bQ8BKD6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf144bQ8BKD6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf144bQ8BKD6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Rnf144bQ8BKD6 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf144bQ8BKD6 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf144bQ8BKD6 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf144bQ8BKD6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.46■□□□□ 0.22
Rnf144bQ8BKD6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Rnf144bQ8BKD6 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms