Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.78■□□□□ 0.92
Smarcal1Q8BJL0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcal1Q8BJL0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcal1Q8BJL0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcal1Q8BJL0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.77■□□□□ 0.92
Smarcal1Q8BJL0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcal1Q8BJL0 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.77■□□□□ 0.92
Smarcal1Q8BJL0 Gm38205-201ENSMUST00000192243 258 ntBASIC20.77■□□□□ 0.92
Smarcal1Q8BJL0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.77■□□□□ 0.92
Smarcal1Q8BJL0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcal1Q8BJL0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcal1Q8BJL0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcal1Q8BJL0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcal1Q8BJL0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcal1Q8BJL0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.76■□□□□ 0.91
Smarcal1Q8BJL0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcal1Q8BJL0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcal1Q8BJL0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Smarcal1Q8BJL0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcal1Q8BJL0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcal1Q8BJL0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcal1Q8BJL0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcal1Q8BJL0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcal1Q8BJL0 Nespas-201ENSMUST00000143738 1083 ntBASIC20.75■□□□□ 0.91
Smarcal1Q8BJL0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcal1Q8BJL0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcal1Q8BJL0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcal1Q8BJL0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcal1Q8BJL0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.74■□□□□ 0.91
Smarcal1Q8BJL0 Gm6365-201ENSMUST00000054711 744 ntBASIC20.74■□□□□ 0.91
Smarcal1Q8BJL0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcal1Q8BJL0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcal1Q8BJL0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Smarcal1Q8BJL0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcal1Q8BJL0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.74■□□□□ 0.91
Smarcal1Q8BJL0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcal1Q8BJL0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.74■□□□□ 0.91
Smarcal1Q8BJL0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Smarcal1Q8BJL0 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.73■□□□□ 0.91
Smarcal1Q8BJL0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcal1Q8BJL0 Gm20760-201ENSMUST00000179197 648 ntBASIC20.73■□□□□ 0.91
Smarcal1Q8BJL0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.73■□□□□ 0.91
Smarcal1Q8BJL0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
Smarcal1Q8BJL0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcal1Q8BJL0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcal1Q8BJL0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcal1Q8BJL0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcal1Q8BJL0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcal1Q8BJL0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcal1Q8BJL0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcal1Q8BJL0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcal1Q8BJL0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcal1Q8BJL0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcal1Q8BJL0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.72■□□□□ 0.91
Smarcal1Q8BJL0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Smarcal1Q8BJL0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcal1Q8BJL0 Gm13148-201ENSMUST00000118892 745 ntBASIC20.72■□□□□ 0.91
Smarcal1Q8BJL0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Smarcal1Q8BJL0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Smarcal1Q8BJL0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcal1Q8BJL0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Smarcal1Q8BJL0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcal1Q8BJL0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcal1Q8BJL0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcal1Q8BJL0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcal1Q8BJL0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcal1Q8BJL0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcal1Q8BJL0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.72■□□□□ 0.91
Smarcal1Q8BJL0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcal1Q8BJL0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.71■□□□□ 0.91
Smarcal1Q8BJL0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcal1Q8BJL0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcal1Q8BJL0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcal1Q8BJL0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.71■□□□□ 0.91
Smarcal1Q8BJL0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcal1Q8BJL0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Smarcal1Q8BJL0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Smarcal1Q8BJL0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Smarcal1Q8BJL0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcal1Q8BJL0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcal1Q8BJL0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcal1Q8BJL0 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.7■□□□□ 0.9
Smarcal1Q8BJL0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcal1Q8BJL0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Smarcal1Q8BJL0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcal1Q8BJL0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcal1Q8BJL0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Smarcal1Q8BJL0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcal1Q8BJL0 Gm10653-202ENSMUST00000139570 835 ntBASIC20.69■□□□□ 0.9
Smarcal1Q8BJL0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcal1Q8BJL0 Gm6420-201ENSMUST00000193885 723 ntBASIC20.69■□□□□ 0.9
Smarcal1Q8BJL0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.69■□□□□ 0.9
Smarcal1Q8BJL0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Smarcal1Q8BJL0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcal1Q8BJL0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Smarcal1Q8BJL0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcal1Q8BJL0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcal1Q8BJL0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcal1Q8BJL0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcal1Q8BJL0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms