Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh20Q8BIZ0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh20Q8BIZ0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh20Q8BIZ0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh20Q8BIZ0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh20Q8BIZ0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh20Q8BIZ0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Pcdh20Q8BIZ0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh20Q8BIZ0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh20Q8BIZ0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Pcdh20Q8BIZ0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh20Q8BIZ0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh20Q8BIZ0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.9■□□□□ 0.62
Pcdh20Q8BIZ0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh20Q8BIZ0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh20Q8BIZ0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh20Q8BIZ0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh20Q8BIZ0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Pcdh20Q8BIZ0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.89■□□□□ 0.61
Pcdh20Q8BIZ0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.89■□□□□ 0.61
Pcdh20Q8BIZ0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh20Q8BIZ0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.89■□□□□ 0.61
Pcdh20Q8BIZ0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh20Q8BIZ0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh20Q8BIZ0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Pcdh20Q8BIZ0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh20Q8BIZ0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh20Q8BIZ0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.88■□□□□ 0.61
Pcdh20Q8BIZ0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.88■□□□□ 0.61
Pcdh20Q8BIZ0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh20Q8BIZ0 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.88■□□□□ 0.61
Pcdh20Q8BIZ0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh20Q8BIZ0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh20Q8BIZ0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Pcdh20Q8BIZ0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh20Q8BIZ0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh20Q8BIZ0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh20Q8BIZ0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh20Q8BIZ0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh20Q8BIZ0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Pcdh20Q8BIZ0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.87■□□□□ 0.61
Pcdh20Q8BIZ0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Pcdh20Q8BIZ0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh20Q8BIZ0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.86■□□□□ 0.61
Pcdh20Q8BIZ0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh20Q8BIZ0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh20Q8BIZ0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.86■□□□□ 0.61
Pcdh20Q8BIZ0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh20Q8BIZ0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh20Q8BIZ0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh20Q8BIZ0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.86■□□□□ 0.61
Pcdh20Q8BIZ0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh20Q8BIZ0 Gm45417-201ENSMUST00000209533 758 ntBASIC18.86■□□□□ 0.61
Pcdh20Q8BIZ0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh20Q8BIZ0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh20Q8BIZ0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Pcdh20Q8BIZ0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh20Q8BIZ0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh20Q8BIZ0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdh20Q8BIZ0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pcdh20Q8BIZ0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh20Q8BIZ0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh20Q8BIZ0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh20Q8BIZ0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.85■□□□□ 0.61
Pcdh20Q8BIZ0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh20Q8BIZ0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh20Q8BIZ0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Pcdh20Q8BIZ0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh20Q8BIZ0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh20Q8BIZ0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh20Q8BIZ0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.84■□□□□ 0.61
Pcdh20Q8BIZ0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh20Q8BIZ0 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Pcdh20Q8BIZ0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh20Q8BIZ0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.83■□□□□ 0.61
Pcdh20Q8BIZ0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdh20Q8BIZ0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdh20Q8BIZ0 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh20Q8BIZ0 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh20Q8BIZ0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh20Q8BIZ0 Golph3-205ENSMUST00000228671 2842 ntBASIC18.83■□□□□ 0.6
Pcdh20Q8BIZ0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh20Q8BIZ0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh20Q8BIZ0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh20Q8BIZ0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
Pcdh20Q8BIZ0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh20Q8BIZ0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh20Q8BIZ0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh20Q8BIZ0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh20Q8BIZ0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh20Q8BIZ0 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh20Q8BIZ0 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh20Q8BIZ0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh20Q8BIZ0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh20Q8BIZ0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh20Q8BIZ0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh20Q8BIZ0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh20Q8BIZ0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh20Q8BIZ0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh20Q8BIZ0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms