Protein–RNA interactions for Protein: Q8BIF2

Rbfox3, RNA binding protein fox-1 homolog 3, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox3Q8BIF2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC14.91□□□□□ -0.02
Rbfox3Q8BIF2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rbfox3Q8BIF2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rbfox3Q8BIF2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rbfox3Q8BIF2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Rbfox3Q8BIF2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rbfox3Q8BIF2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rbfox3Q8BIF2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rbfox3Q8BIF2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC14.9□□□□□ -0.02
Rbfox3Q8BIF2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rbfox3Q8BIF2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rbfox3Q8BIF2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rbfox3Q8BIF2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rbfox3Q8BIF2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rbfox3Q8BIF2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rbfox3Q8BIF2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rbfox3Q8BIF2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC14.9□□□□□ -0.02
Rbfox3Q8BIF2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Rbfox3Q8BIF2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC14.9□□□□□ -0.02
Rbfox3Q8BIF2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.9□□□□□ -0.02
Rbfox3Q8BIF2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rbfox3Q8BIF2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Rbfox3Q8BIF2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rbfox3Q8BIF2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Rbfox3Q8BIF2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rbfox3Q8BIF2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rbfox3Q8BIF2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rbfox3Q8BIF2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rbfox3Q8BIF2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rbfox3Q8BIF2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.89□□□□□ -0.03
Rbfox3Q8BIF2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.89□□□□□ -0.03
Rbfox3Q8BIF2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rbfox3Q8BIF2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rbfox3Q8BIF2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rbfox3Q8BIF2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Rbfox3Q8BIF2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rbfox3Q8BIF2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Rbfox3Q8BIF2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Rbfox3Q8BIF2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rbfox3Q8BIF2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rbfox3Q8BIF2 Gm37035-201ENSMUST00000194809 2148 ntBASIC14.88□□□□□ -0.03
Rbfox3Q8BIF2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rbfox3Q8BIF2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rbfox3Q8BIF2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rbfox3Q8BIF2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rbfox3Q8BIF2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rbfox3Q8BIF2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rbfox3Q8BIF2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rbfox3Q8BIF2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rbfox3Q8BIF2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rbfox3Q8BIF2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Rbfox3Q8BIF2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rbfox3Q8BIF2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rbfox3Q8BIF2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
Rbfox3Q8BIF2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rbfox3Q8BIF2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
Rbfox3Q8BIF2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rbfox3Q8BIF2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rbfox3Q8BIF2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rbfox3Q8BIF2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC14.87□□□□□ -0.03
Rbfox3Q8BIF2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rbfox3Q8BIF2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.87□□□□□ -0.03
Rbfox3Q8BIF2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rbfox3Q8BIF2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rbfox3Q8BIF2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rbfox3Q8BIF2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Rbfox3Q8BIF2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rbfox3Q8BIF2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox3Q8BIF2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox3Q8BIF2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox3Q8BIF2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox3Q8BIF2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox3Q8BIF2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox3Q8BIF2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox3Q8BIF2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Rbfox3Q8BIF2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox3Q8BIF2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox3Q8BIF2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox3Q8BIF2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox3Q8BIF2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox3Q8BIF2 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.86□□□□□ -0.03
Rbfox3Q8BIF2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox3Q8BIF2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox3Q8BIF2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox3Q8BIF2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Rbfox3Q8BIF2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Rbfox3Q8BIF2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox3Q8BIF2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox3Q8BIF2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox3Q8BIF2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rbfox3Q8BIF2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rbfox3Q8BIF2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC14.85□□□□□ -0.03
Rbfox3Q8BIF2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rbfox3Q8BIF2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rbfox3Q8BIF2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rbfox3Q8BIF2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rbfox3Q8BIF2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rbfox3Q8BIF2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC14.85□□□□□ -0.03
Rbfox3Q8BIF2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rbfox3Q8BIF2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms