Protein–RNA interactions for Protein: Q80ZI6

Lrsam1, E3 ubiquitin-protein ligase LRSAM1, mousemouse

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrsam1Q80ZI6 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lrsam1Q80ZI6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lrsam1Q80ZI6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.98■□□□□ 0.95
Lrsam1Q80ZI6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lrsam1Q80ZI6 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lrsam1Q80ZI6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lrsam1Q80ZI6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lrsam1Q80ZI6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lrsam1Q80ZI6 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lrsam1Q80ZI6 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lrsam1Q80ZI6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.97■□□□□ 0.95
Lrsam1Q80ZI6 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Lrsam1Q80ZI6 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Lrsam1Q80ZI6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.97■□□□□ 0.95
Lrsam1Q80ZI6 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Lrsam1Q80ZI6 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Lrsam1Q80ZI6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Lrsam1Q80ZI6 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lrsam1Q80ZI6 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Lrsam1Q80ZI6 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Lrsam1Q80ZI6 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.96■□□□□ 0.95
Lrsam1Q80ZI6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lrsam1Q80ZI6 Gm7143-201ENSMUST00000222811 859 ntBASIC20.96■□□□□ 0.95
Lrsam1Q80ZI6 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lrsam1Q80ZI6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lrsam1Q80ZI6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lrsam1Q80ZI6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Lrsam1Q80ZI6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lrsam1Q80ZI6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Lrsam1Q80ZI6 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Lrsam1Q80ZI6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.95■□□□□ 0.94
Lrsam1Q80ZI6 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lrsam1Q80ZI6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lrsam1Q80ZI6 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Lrsam1Q80ZI6 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lrsam1Q80ZI6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lrsam1Q80ZI6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lrsam1Q80ZI6 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Lrsam1Q80ZI6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
Lrsam1Q80ZI6 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lrsam1Q80ZI6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lrsam1Q80ZI6 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lrsam1Q80ZI6 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Lrsam1Q80ZI6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Lrsam1Q80ZI6 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lrsam1Q80ZI6 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lrsam1Q80ZI6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Lrsam1Q80ZI6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Lrsam1Q80ZI6 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lrsam1Q80ZI6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.93■□□□□ 0.94
Lrsam1Q80ZI6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Lrsam1Q80ZI6 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lrsam1Q80ZI6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Lrsam1Q80ZI6 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lrsam1Q80ZI6 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lrsam1Q80ZI6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lrsam1Q80ZI6 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lrsam1Q80ZI6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.93■□□□□ 0.94
Lrsam1Q80ZI6 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lrsam1Q80ZI6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Lrsam1Q80ZI6 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lrsam1Q80ZI6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lrsam1Q80ZI6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.92■□□□□ 0.94
Lrsam1Q80ZI6 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Lrsam1Q80ZI6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lrsam1Q80ZI6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lrsam1Q80ZI6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Lrsam1Q80ZI6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lrsam1Q80ZI6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Lrsam1Q80ZI6 Golph3-205ENSMUST00000228671 2842 ntBASIC20.91■□□□□ 0.94
Lrsam1Q80ZI6 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lrsam1Q80ZI6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Lrsam1Q80ZI6 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Lrsam1Q80ZI6 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lrsam1Q80ZI6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.91■□□□□ 0.94
Lrsam1Q80ZI6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lrsam1Q80ZI6 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.91■□□□□ 0.94
Lrsam1Q80ZI6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lrsam1Q80ZI6 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lrsam1Q80ZI6 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lrsam1Q80ZI6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lrsam1Q80ZI6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrsam1Q80ZI6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrsam1Q80ZI6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.9■□□□□ 0.94
Lrsam1Q80ZI6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrsam1Q80ZI6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrsam1Q80ZI6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Lrsam1Q80ZI6 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrsam1Q80ZI6 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrsam1Q80ZI6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrsam1Q80ZI6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.9■□□□□ 0.94
Lrsam1Q80ZI6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Lrsam1Q80ZI6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lrsam1Q80ZI6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrsam1Q80ZI6 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lrsam1Q80ZI6 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Lrsam1Q80ZI6 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Lrsam1Q80ZI6 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.89■□□□□ 0.94
Lrsam1Q80ZI6 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Lrsam1Q80ZI6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms