Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim36Q80WG7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim36Q80WG7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim36Q80WG7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim36Q80WG7 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim36Q80WG7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim36Q80WG7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim36Q80WG7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim36Q80WG7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim36Q80WG7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.72■□□□□ 0.59
Trim36Q80WG7 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.72■□□□□ 0.59
Trim36Q80WG7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim36Q80WG7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim36Q80WG7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.71■□□□□ 0.59
Trim36Q80WG7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim36Q80WG7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim36Q80WG7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim36Q80WG7 Gm12821-201ENSMUST00000120022 600 ntBASIC18.71■□□□□ 0.59
Trim36Q80WG7 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim36Q80WG7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim36Q80WG7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim36Q80WG7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim36Q80WG7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Trim36Q80WG7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim36Q80WG7 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim36Q80WG7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim36Q80WG7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.7■□□□□ 0.58
Trim36Q80WG7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Trim36Q80WG7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim36Q80WG7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim36Q80WG7 Gm7143-201ENSMUST00000222811 859 ntBASIC18.7■□□□□ 0.58
Trim36Q80WG7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim36Q80WG7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim36Q80WG7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trim36Q80WG7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim36Q80WG7 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.69■□□□□ 0.58
Trim36Q80WG7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.69■□□□□ 0.58
Trim36Q80WG7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.69■□□□□ 0.58
Trim36Q80WG7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.69■□□□□ 0.58
Trim36Q80WG7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.69■□□□□ 0.58
Trim36Q80WG7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim36Q80WG7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.69■□□□□ 0.58
Trim36Q80WG7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim36Q80WG7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim36Q80WG7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim36Q80WG7 Gm45417-201ENSMUST00000209533 758 ntBASIC18.68■□□□□ 0.58
Trim36Q80WG7 Gm9870-201ENSMUST00000063874 645 ntBASIC18.68■□□□□ 0.58
Trim36Q80WG7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim36Q80WG7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim36Q80WG7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim36Q80WG7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim36Q80WG7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim36Q80WG7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim36Q80WG7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim36Q80WG7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim36Q80WG7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim36Q80WG7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim36Q80WG7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim36Q80WG7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim36Q80WG7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim36Q80WG7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim36Q80WG7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim36Q80WG7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim36Q80WG7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim36Q80WG7 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.66■□□□□ 0.58
Trim36Q80WG7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim36Q80WG7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim36Q80WG7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim36Q80WG7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim36Q80WG7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim36Q80WG7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim36Q80WG7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trim36Q80WG7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim36Q80WG7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim36Q80WG7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trim36Q80WG7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim36Q80WG7 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim36Q80WG7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim36Q80WG7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.65■□□□□ 0.58
Trim36Q80WG7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim36Q80WG7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.65■□□□□ 0.58
Trim36Q80WG7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim36Q80WG7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim36Q80WG7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim36Q80WG7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim36Q80WG7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.65■□□□□ 0.58
Trim36Q80WG7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim36Q80WG7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Trim36Q80WG7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Trim36Q80WG7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Trim36Q80WG7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim36Q80WG7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim36Q80WG7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.64■□□□□ 0.57
Trim36Q80WG7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim36Q80WG7 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim36Q80WG7 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.64■□□□□ 0.57
Trim36Q80WG7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Trim36Q80WG7 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim36Q80WG7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim36Q80WG7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms