Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC22.45■■□□□ 1.19
Prpf40bQ80W14 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Prpf40bQ80W14 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Prpf40bQ80W14 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Prpf40bQ80W14 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC22.45■■□□□ 1.18
Prpf40bQ80W14 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Prpf40bQ80W14 Gm34220-201ENSMUST00000223001 2709 ntBASIC22.45■■□□□ 1.18
Prpf40bQ80W14 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Prpf40bQ80W14 AC122428.2-201ENSMUST00000216321 1832 ntBASIC22.45■■□□□ 1.18
Prpf40bQ80W14 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Prpf40bQ80W14 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Prpf40bQ80W14 Gm13234-201ENSMUST00000120010 747 ntBASIC22.44■■□□□ 1.18
Prpf40bQ80W14 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
Prpf40bQ80W14 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Prpf40bQ80W14 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC22.44■■□□□ 1.18
Prpf40bQ80W14 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Prpf40bQ80W14 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Prpf40bQ80W14 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Prpf40bQ80W14 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Prpf40bQ80W14 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Prpf40bQ80W14 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Prpf40bQ80W14 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Prpf40bQ80W14 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Prpf40bQ80W14 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Prpf40bQ80W14 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Prpf40bQ80W14 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Prpf40bQ80W14 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Prpf40bQ80W14 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Prpf40bQ80W14 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Prpf40bQ80W14 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
Prpf40bQ80W14 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC22.43■■□□□ 1.18
Prpf40bQ80W14 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Prpf40bQ80W14 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Prpf40bQ80W14 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Prpf40bQ80W14 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Prpf40bQ80W14 Mir7071-201ENSMUST00000184847 69 ntBASIC22.42■■□□□ 1.18
Prpf40bQ80W14 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC22.42■■□□□ 1.18
Prpf40bQ80W14 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Prpf40bQ80W14 AC152827.1-201ENSMUST00000221143 2189 ntBASIC22.42■■□□□ 1.18
Prpf40bQ80W14 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.42■■□□□ 1.18
Prpf40bQ80W14 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Prpf40bQ80W14 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Prpf40bQ80W14 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Prpf40bQ80W14 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Prpf40bQ80W14 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
Prpf40bQ80W14 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC22.41■■□□□ 1.18
Prpf40bQ80W14 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Prpf40bQ80W14 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC22.41■■□□□ 1.18
Prpf40bQ80W14 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Prpf40bQ80W14 Reep4-203ENSMUST00000226563 1444 ntBASIC22.4■■□□□ 1.18
Prpf40bQ80W14 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Prpf40bQ80W14 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Prpf40bQ80W14 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Prpf40bQ80W14 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Prpf40bQ80W14 Gm20760-201ENSMUST00000179197 648 ntBASIC22.4■■□□□ 1.18
Prpf40bQ80W14 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Prpf40bQ80W14 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Prpf40bQ80W14 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Prpf40bQ80W14 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Prpf40bQ80W14 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Prpf40bQ80W14 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Prpf40bQ80W14 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Prpf40bQ80W14 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC22.39■■□□□ 1.18
Prpf40bQ80W14 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Prpf40bQ80W14 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC22.39■■□□□ 1.17
Prpf40bQ80W14 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
Prpf40bQ80W14 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Prpf40bQ80W14 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Prpf40bQ80W14 Gm27045-201ENSMUST00000182145 1402 ntBASIC22.39■■□□□ 1.17
Prpf40bQ80W14 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Prpf40bQ80W14 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Prpf40bQ80W14 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Prpf40bQ80W14 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC22.38■■□□□ 1.17
Prpf40bQ80W14 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Prpf40bQ80W14 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Prpf40bQ80W14 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Prpf40bQ80W14 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
Prpf40bQ80W14 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
Prpf40bQ80W14 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
Prpf40bQ80W14 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Prpf40bQ80W14 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Prpf40bQ80W14 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Prpf40bQ80W14 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
Prpf40bQ80W14 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Prpf40bQ80W14 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Prpf40bQ80W14 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Prpf40bQ80W14 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Prpf40bQ80W14 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC22.37■■□□□ 1.17
Prpf40bQ80W14 Mir5133-201ENSMUST00000174955 77 ntBASIC22.37■■□□□ 1.17
Prpf40bQ80W14 Gm7514-201ENSMUST00000209475 934 ntBASIC22.37■■□□□ 1.17
Prpf40bQ80W14 AC137127.1-201ENSMUST00000213466 1078 ntBASIC22.37■■□□□ 1.17
Prpf40bQ80W14 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Prpf40bQ80W14 Gm4968-201ENSMUST00000071458 858 ntBASIC22.37■■□□□ 1.17
Prpf40bQ80W14 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Prpf40bQ80W14 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Prpf40bQ80W14 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Prpf40bQ80W14 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Prpf40bQ80W14 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Prpf40bQ80W14 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Prpf40bQ80W14 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC22.36■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms