Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Csmd3Q80T79 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Csmd3Q80T79 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Csmd3Q80T79 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Csmd3Q80T79 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Csmd3Q80T79 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Csmd3Q80T79 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Csmd3Q80T79 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.53□□□□□ -0.24
Csmd3Q80T79 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Csmd3Q80T79 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.53□□□□□ -0.24
Csmd3Q80T79 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Csmd3Q80T79 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.53□□□□□ -0.24
Csmd3Q80T79 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Csmd3Q80T79 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Csmd3Q80T79 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Csmd3Q80T79 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Csmd3Q80T79 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC13.53□□□□□ -0.24
Csmd3Q80T79 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Csmd3Q80T79 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Csmd3Q80T79 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Csmd3Q80T79 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Csmd3Q80T79 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Csmd3Q80T79 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Csmd3Q80T79 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC13.53□□□□□ -0.24
Csmd3Q80T79 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Csmd3Q80T79 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.53□□□□□ -0.24
Csmd3Q80T79 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Csmd3Q80T79 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Csmd3Q80T79 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.52□□□□□ -0.24
Csmd3Q80T79 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Csmd3Q80T79 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Csmd3Q80T79 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Csmd3Q80T79 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Csmd3Q80T79 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC13.52□□□□□ -0.25
Csmd3Q80T79 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Csmd3Q80T79 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Csmd3Q80T79 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.52□□□□□ -0.25
Csmd3Q80T79 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Csmd3Q80T79 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Csmd3Q80T79 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Csmd3Q80T79 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Csmd3Q80T79 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Csmd3Q80T79 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Csmd3Q80T79 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Csmd3Q80T79 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Csmd3Q80T79 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Csmd3Q80T79 Mir6236-201ENSMUST00000184437 123 ntBASIC13.51□□□□□ -0.25
Csmd3Q80T79 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Csmd3Q80T79 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Csmd3Q80T79 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Csmd3Q80T79 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC13.51□□□□□ -0.25
Csmd3Q80T79 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Csmd3Q80T79 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Csmd3Q80T79 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Csmd3Q80T79 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Csmd3Q80T79 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Csmd3Q80T79 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Csmd3Q80T79 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Csmd3Q80T79 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Csmd3Q80T79 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Csmd3Q80T79 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Csmd3Q80T79 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Csmd3Q80T79 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Csmd3Q80T79 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Csmd3Q80T79 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Csmd3Q80T79 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Csmd3Q80T79 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Csmd3Q80T79 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Csmd3Q80T79 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Csmd3Q80T79 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Csmd3Q80T79 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Csmd3Q80T79 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Csmd3Q80T79 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Csmd3Q80T79 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Csmd3Q80T79 Gm17641-201ENSMUST00000166328 2350 ntBASIC13.49□□□□□ -0.25
Csmd3Q80T79 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Csmd3Q80T79 Gm42911-201ENSMUST00000199360 1630 ntBASIC13.49□□□□□ -0.25
Csmd3Q80T79 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC13.49□□□□□ -0.25
Csmd3Q80T79 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Csmd3Q80T79 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Csmd3Q80T79 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.49□□□□□ -0.25
Csmd3Q80T79 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Csmd3Q80T79 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Csmd3Q80T79 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Csmd3Q80T79 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Csmd3Q80T79 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Csmd3Q80T79 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Csmd3Q80T79 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Csmd3Q80T79 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.49□□□□□ -0.25
Csmd3Q80T79 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Csmd3Q80T79 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Csmd3Q80T79 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Csmd3Q80T79 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC13.48□□□□□ -0.25
Csmd3Q80T79 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Csmd3Q80T79 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.48□□□□□ -0.25
Csmd3Q80T79 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Csmd3Q80T79 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Csmd3Q80T79 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Csmd3Q80T79 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Csmd3Q80T79 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms