Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf38bQ80SY5 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf38bQ80SY5 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf38bQ80SY5 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf38bQ80SY5 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf38bQ80SY5 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf38bQ80SY5 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf38bQ80SY5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf38bQ80SY5 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.25■□□□□ 0.83
Prpf38bQ80SY5 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf38bQ80SY5 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf38bQ80SY5 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf38bQ80SY5 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf38bQ80SY5 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf38bQ80SY5 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Prpf38bQ80SY5 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.24■□□□□ 0.83
Prpf38bQ80SY5 Gm43530-201ENSMUST00000195920 274 ntBASIC20.24■□□□□ 0.83
Prpf38bQ80SY5 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf38bQ80SY5 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf38bQ80SY5 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf38bQ80SY5 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf38bQ80SY5 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf38bQ80SY5 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf38bQ80SY5 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf38bQ80SY5 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf38bQ80SY5 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf38bQ80SY5 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf38bQ80SY5 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf38bQ80SY5 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf38bQ80SY5 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf38bQ80SY5 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf38bQ80SY5 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf38bQ80SY5 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf38bQ80SY5 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.23■□□□□ 0.83
Prpf38bQ80SY5 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf38bQ80SY5 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf38bQ80SY5 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Prpf38bQ80SY5 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf38bQ80SY5 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf38bQ80SY5 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Prpf38bQ80SY5 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf38bQ80SY5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf38bQ80SY5 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf38bQ80SY5 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.22■□□□□ 0.83
Prpf38bQ80SY5 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.22■□□□□ 0.83
Prpf38bQ80SY5 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf38bQ80SY5 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf38bQ80SY5 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.22■□□□□ 0.83
Prpf38bQ80SY5 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf38bQ80SY5 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf38bQ80SY5 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf38bQ80SY5 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf38bQ80SY5 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf38bQ80SY5 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf38bQ80SY5 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.21■□□□□ 0.83
Prpf38bQ80SY5 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.21■□□□□ 0.83
Prpf38bQ80SY5 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf38bQ80SY5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Prpf38bQ80SY5 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Prpf38bQ80SY5 Mir5133-201ENSMUST00000174955 77 ntBASIC20.21■□□□□ 0.83
Prpf38bQ80SY5 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Prpf38bQ80SY5 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf38bQ80SY5 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf38bQ80SY5 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf38bQ80SY5 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf38bQ80SY5 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.2■□□□□ 0.82
Prpf38bQ80SY5 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf38bQ80SY5 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.2■□□□□ 0.82
Prpf38bQ80SY5 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf38bQ80SY5 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Prpf38bQ80SY5 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf38bQ80SY5 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf38bQ80SY5 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf38bQ80SY5 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf38bQ80SY5 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.19■□□□□ 0.82
Prpf38bQ80SY5 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.19■□□□□ 0.82
Prpf38bQ80SY5 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf38bQ80SY5 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf38bQ80SY5 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Prpf38bQ80SY5 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
Prpf38bQ80SY5 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf38bQ80SY5 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf38bQ80SY5 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf38bQ80SY5 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf38bQ80SY5 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf38bQ80SY5 Gm11421-201ENSMUST00000122124 294 ntBASIC20.18■□□□□ 0.82
Prpf38bQ80SY5 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.18■□□□□ 0.82
Prpf38bQ80SY5 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf38bQ80SY5 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf38bQ80SY5 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf38bQ80SY5 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf38bQ80SY5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf38bQ80SY5 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Prpf38bQ80SY5 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.17■□□□□ 0.82
Prpf38bQ80SY5 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Prpf38bQ80SY5 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Prpf38bQ80SY5 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf38bQ80SY5 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Prpf38bQ80SY5 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf38bQ80SY5 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms