Protein–RNA interactions for Protein: Q7TN37

Trpm4, Transient receptor potential cation channel subfamily M member 4, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm4Q7TN37 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trpm4Q7TN37 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.85■□□□□ 0.77
Trpm4Q7TN37 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trpm4Q7TN37 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trpm4Q7TN37 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.85■□□□□ 0.77
Trpm4Q7TN37 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trpm4Q7TN37 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trpm4Q7TN37 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trpm4Q7TN37 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trpm4Q7TN37 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trpm4Q7TN37 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trpm4Q7TN37 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trpm4Q7TN37 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trpm4Q7TN37 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Trpm4Q7TN37 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trpm4Q7TN37 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trpm4Q7TN37 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.84■□□□□ 0.77
Trpm4Q7TN37 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trpm4Q7TN37 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.84■□□□□ 0.77
Trpm4Q7TN37 Gm9870-201ENSMUST00000063874 645 ntBASIC19.84■□□□□ 0.77
Trpm4Q7TN37 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trpm4Q7TN37 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trpm4Q7TN37 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trpm4Q7TN37 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trpm4Q7TN37 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trpm4Q7TN37 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trpm4Q7TN37 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
Trpm4Q7TN37 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trpm4Q7TN37 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trpm4Q7TN37 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trpm4Q7TN37 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trpm4Q7TN37 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trpm4Q7TN37 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trpm4Q7TN37 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.83■□□□□ 0.76
Trpm4Q7TN37 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trpm4Q7TN37 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
Trpm4Q7TN37 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trpm4Q7TN37 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trpm4Q7TN37 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trpm4Q7TN37 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trpm4Q7TN37 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.82■□□□□ 0.76
Trpm4Q7TN37 Gm8493-201ENSMUST00000196881 489 ntBASIC19.82■□□□□ 0.76
Trpm4Q7TN37 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trpm4Q7TN37 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trpm4Q7TN37 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trpm4Q7TN37 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Trpm4Q7TN37 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trpm4Q7TN37 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Trpm4Q7TN37 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trpm4Q7TN37 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trpm4Q7TN37 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trpm4Q7TN37 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trpm4Q7TN37 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.81■□□□□ 0.76
Trpm4Q7TN37 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Trpm4Q7TN37 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Trpm4Q7TN37 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.81■□□□□ 0.76
Trpm4Q7TN37 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Trpm4Q7TN37 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trpm4Q7TN37 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trpm4Q7TN37 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trpm4Q7TN37 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trpm4Q7TN37 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trpm4Q7TN37 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trpm4Q7TN37 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.8■□□□□ 0.76
Trpm4Q7TN37 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.8■□□□□ 0.76
Trpm4Q7TN37 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trpm4Q7TN37 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trpm4Q7TN37 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.79■□□□□ 0.76
Trpm4Q7TN37 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trpm4Q7TN37 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.79■□□□□ 0.76
Trpm4Q7TN37 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trpm4Q7TN37 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trpm4Q7TN37 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trpm4Q7TN37 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trpm4Q7TN37 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trpm4Q7TN37 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trpm4Q7TN37 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trpm4Q7TN37 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trpm4Q7TN37 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.78■□□□□ 0.76
Trpm4Q7TN37 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trpm4Q7TN37 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.78■□□□□ 0.76
Trpm4Q7TN37 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trpm4Q7TN37 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trpm4Q7TN37 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trpm4Q7TN37 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trpm4Q7TN37 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trpm4Q7TN37 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trpm4Q7TN37 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trpm4Q7TN37 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trpm4Q7TN37 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.77■□□□□ 0.76
Trpm4Q7TN37 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.77■□□□□ 0.76
Trpm4Q7TN37 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trpm4Q7TN37 Gm7143-201ENSMUST00000222811 859 ntBASIC19.77■□□□□ 0.76
Trpm4Q7TN37 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trpm4Q7TN37 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trpm4Q7TN37 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trpm4Q7TN37 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trpm4Q7TN37 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Trpm4Q7TN37 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trpm4Q7TN37 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms