Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn4bQ7M729 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn4bQ7M729 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn4bQ7M729 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn4bQ7M729 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn4bQ7M729 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn4bQ7M729 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Scn4bQ7M729 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.94■□□□□ 0.62
Scn4bQ7M729 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Scn4bQ7M729 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Scn4bQ7M729 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.94■□□□□ 0.62
Scn4bQ7M729 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn4bQ7M729 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Scn4bQ7M729 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn4bQ7M729 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn4bQ7M729 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn4bQ7M729 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.93■□□□□ 0.62
Scn4bQ7M729 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn4bQ7M729 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn4bQ7M729 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Scn4bQ7M729 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn4bQ7M729 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.92■□□□□ 0.62
Scn4bQ7M729 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn4bQ7M729 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.92■□□□□ 0.62
Scn4bQ7M729 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.92■□□□□ 0.62
Scn4bQ7M729 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn4bQ7M729 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn4bQ7M729 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn4bQ7M729 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Scn4bQ7M729 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.91■□□□□ 0.62
Scn4bQ7M729 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.91■□□□□ 0.62
Scn4bQ7M729 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Scn4bQ7M729 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn4bQ7M729 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Scn4bQ7M729 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn4bQ7M729 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Scn4bQ7M729 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Scn4bQ7M729 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn4bQ7M729 Iqck-206ENSMUST00000208658 2891 ntBASIC18.9■□□□□ 0.62
Scn4bQ7M729 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.9■□□□□ 0.62
Scn4bQ7M729 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.9■□□□□ 0.62
Scn4bQ7M729 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn4bQ7M729 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn4bQ7M729 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn4bQ7M729 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Scn4bQ7M729 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.89■□□□□ 0.61
Scn4bQ7M729 Spcs1-204ENSMUST00000226782 949 ntBASIC18.89■□□□□ 0.61
Scn4bQ7M729 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Scn4bQ7M729 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Scn4bQ7M729 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Scn4bQ7M729 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn4bQ7M729 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Scn4bQ7M729 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.89■□□□□ 0.61
Scn4bQ7M729 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.88■□□□□ 0.61
Scn4bQ7M729 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scn4bQ7M729 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.88■□□□□ 0.61
Scn4bQ7M729 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn4bQ7M729 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn4bQ7M729 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn4bQ7M729 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn4bQ7M729 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn4bQ7M729 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn4bQ7M729 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn4bQ7M729 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Scn4bQ7M729 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Scn4bQ7M729 Gm12251-201ENSMUST00000117893 792 ntBASIC18.87■□□□□ 0.61
Scn4bQ7M729 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.87■□□□□ 0.61
Scn4bQ7M729 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Scn4bQ7M729 Gm27454-201ENSMUST00000185090 204 ntBASIC18.87■□□□□ 0.61
Scn4bQ7M729 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn4bQ7M729 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.87■□□□□ 0.61
Scn4bQ7M729 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn4bQ7M729 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn4bQ7M729 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn4bQ7M729 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn4bQ7M729 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn4bQ7M729 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Scn4bQ7M729 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn4bQ7M729 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn4bQ7M729 Serp2-204ENSMUST00000228055 705 ntBASIC18.86■□□□□ 0.61
Scn4bQ7M729 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn4bQ7M729 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn4bQ7M729 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn4bQ7M729 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Scn4bQ7M729 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn4bQ7M729 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn4bQ7M729 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Scn4bQ7M729 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.85■□□□□ 0.61
Scn4bQ7M729 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Scn4bQ7M729 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.85■□□□□ 0.61
Scn4bQ7M729 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.85■□□□□ 0.61
Scn4bQ7M729 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scn4bQ7M729 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.85■□□□□ 0.61
Scn4bQ7M729 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.84■□□□□ 0.61
Scn4bQ7M729 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn4bQ7M729 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn4bQ7M729 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Scn4bQ7M729 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Scn4bQ7M729 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn4bQ7M729 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms