Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rif1Q6PR54 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rif1Q6PR54 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rif1Q6PR54 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rif1Q6PR54 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.5■□□□□ 0.23
Rif1Q6PR54 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rif1Q6PR54 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rif1Q6PR54 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rif1Q6PR54 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rif1Q6PR54 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rif1Q6PR54 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.49■□□□□ 0.23
Rif1Q6PR54 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC16.49■□□□□ 0.23
Rif1Q6PR54 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rif1Q6PR54 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rif1Q6PR54 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rif1Q6PR54 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Rif1Q6PR54 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rif1Q6PR54 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rif1Q6PR54 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rif1Q6PR54 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rif1Q6PR54 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rif1Q6PR54 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rif1Q6PR54 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rif1Q6PR54 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.48■□□□□ 0.23
Rif1Q6PR54 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rif1Q6PR54 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rif1Q6PR54 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rif1Q6PR54 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rif1Q6PR54 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rif1Q6PR54 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Rif1Q6PR54 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rif1Q6PR54 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rif1Q6PR54 Gm5417-201ENSMUST00000079706 384 ntBASIC16.47■□□□□ 0.23
Rif1Q6PR54 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rif1Q6PR54 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rif1Q6PR54 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.47■□□□□ 0.23
Rif1Q6PR54 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rif1Q6PR54 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rif1Q6PR54 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rif1Q6PR54 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rif1Q6PR54 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.47■□□□□ 0.23
Rif1Q6PR54 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rif1Q6PR54 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rif1Q6PR54 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Rif1Q6PR54 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Rif1Q6PR54 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rif1Q6PR54 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rif1Q6PR54 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rif1Q6PR54 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rif1Q6PR54 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rif1Q6PR54 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Rif1Q6PR54 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.22
Rif1Q6PR54 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rif1Q6PR54 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rif1Q6PR54 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rif1Q6PR54 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rif1Q6PR54 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rif1Q6PR54 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.45■□□□□ 0.22
Rif1Q6PR54 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rif1Q6PR54 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rif1Q6PR54 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rif1Q6PR54 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Rif1Q6PR54 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rif1Q6PR54 Gm18666-201ENSMUST00000190039 958 ntBASIC16.45■□□□□ 0.22
Rif1Q6PR54 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rif1Q6PR54 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rif1Q6PR54 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rif1Q6PR54 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.44■□□□□ 0.22
Rif1Q6PR54 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Rif1Q6PR54 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rif1Q6PR54 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rif1Q6PR54 Gm9103-201ENSMUST00000119371 405 ntBASIC16.44■□□□□ 0.22
Rif1Q6PR54 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rif1Q6PR54 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rif1Q6PR54 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rif1Q6PR54 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rif1Q6PR54 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rif1Q6PR54 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.43■□□□□ 0.22
Rif1Q6PR54 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.43■□□□□ 0.22
Rif1Q6PR54 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rif1Q6PR54 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rif1Q6PR54 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rif1Q6PR54 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rif1Q6PR54 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rif1Q6PR54 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rif1Q6PR54 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rif1Q6PR54 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rif1Q6PR54 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rif1Q6PR54 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Rif1Q6PR54 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rif1Q6PR54 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Rif1Q6PR54 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rif1Q6PR54 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rif1Q6PR54 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rif1Q6PR54 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Rif1Q6PR54 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Rif1Q6PR54 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rif1Q6PR54 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rif1Q6PR54 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.41■□□□□ 0.22
Rif1Q6PR54 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms