Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.81■□□□□ 0.92
CtifQ6PEE2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CtifQ6PEE2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CtifQ6PEE2 Gm15039-201ENSMUST00000118914 875 ntBASIC20.81■□□□□ 0.92
CtifQ6PEE2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CtifQ6PEE2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CtifQ6PEE2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.81■□□□□ 0.92
CtifQ6PEE2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CtifQ6PEE2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
CtifQ6PEE2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CtifQ6PEE2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CtifQ6PEE2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.8■□□□□ 0.92
CtifQ6PEE2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.8■□□□□ 0.92
CtifQ6PEE2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CtifQ6PEE2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CtifQ6PEE2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
CtifQ6PEE2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CtifQ6PEE2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CtifQ6PEE2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CtifQ6PEE2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CtifQ6PEE2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CtifQ6PEE2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CtifQ6PEE2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CtifQ6PEE2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CtifQ6PEE2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CtifQ6PEE2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.79■□□□□ 0.92
CtifQ6PEE2 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.79■□□□□ 0.92
CtifQ6PEE2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CtifQ6PEE2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
CtifQ6PEE2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CtifQ6PEE2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CtifQ6PEE2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CtifQ6PEE2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CtifQ6PEE2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CtifQ6PEE2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CtifQ6PEE2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
CtifQ6PEE2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.78■□□□□ 0.92
CtifQ6PEE2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CtifQ6PEE2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CtifQ6PEE2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
CtifQ6PEE2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CtifQ6PEE2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CtifQ6PEE2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CtifQ6PEE2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CtifQ6PEE2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CtifQ6PEE2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CtifQ6PEE2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CtifQ6PEE2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.77■□□□□ 0.92
CtifQ6PEE2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CtifQ6PEE2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CtifQ6PEE2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.77■□□□□ 0.91
CtifQ6PEE2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CtifQ6PEE2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.76■□□□□ 0.91
CtifQ6PEE2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CtifQ6PEE2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CtifQ6PEE2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CtifQ6PEE2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CtifQ6PEE2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.76■□□□□ 0.91
CtifQ6PEE2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CtifQ6PEE2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CtifQ6PEE2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CtifQ6PEE2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CtifQ6PEE2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CtifQ6PEE2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CtifQ6PEE2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
CtifQ6PEE2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CtifQ6PEE2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CtifQ6PEE2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.75■□□□□ 0.91
CtifQ6PEE2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CtifQ6PEE2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.75■□□□□ 0.91
CtifQ6PEE2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CtifQ6PEE2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CtifQ6PEE2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.74■□□□□ 0.91
CtifQ6PEE2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CtifQ6PEE2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CtifQ6PEE2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CtifQ6PEE2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CtifQ6PEE2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CtifQ6PEE2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.74■□□□□ 0.91
CtifQ6PEE2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CtifQ6PEE2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CtifQ6PEE2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CtifQ6PEE2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CtifQ6PEE2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CtifQ6PEE2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CtifQ6PEE2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CtifQ6PEE2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CtifQ6PEE2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CtifQ6PEE2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CtifQ6PEE2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CtifQ6PEE2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.73■□□□□ 0.91
CtifQ6PEE2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CtifQ6PEE2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CtifQ6PEE2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CtifQ6PEE2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CtifQ6PEE2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CtifQ6PEE2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CtifQ6PEE2 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.72■□□□□ 0.91
CtifQ6PEE2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.72■□□□□ 0.91
CtifQ6PEE2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms