Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcd3Q6P9Z1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcd3Q6P9Z1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcd3Q6P9Z1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcd3Q6P9Z1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcd3Q6P9Z1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.8■□□□□ 0.44
Smarcd3Q6P9Z1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcd3Q6P9Z1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Smarcd3Q6P9Z1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Smarcd3Q6P9Z1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcd3Q6P9Z1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
Smarcd3Q6P9Z1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.8■□□□□ 0.44
Smarcd3Q6P9Z1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Smarcd3Q6P9Z1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcd3Q6P9Z1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Smarcd3Q6P9Z1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcd3Q6P9Z1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcd3Q6P9Z1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcd3Q6P9Z1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.79■□□□□ 0.44
Smarcd3Q6P9Z1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcd3Q6P9Z1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcd3Q6P9Z1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcd3Q6P9Z1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
Smarcd3Q6P9Z1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcd3Q6P9Z1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcd3Q6P9Z1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcd3Q6P9Z1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Smarcd3Q6P9Z1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcd3Q6P9Z1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcd3Q6P9Z1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Smarcd3Q6P9Z1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcd3Q6P9Z1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcd3Q6P9Z1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcd3Q6P9Z1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcd3Q6P9Z1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcd3Q6P9Z1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Smarcd3Q6P9Z1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.77■□□□□ 0.44
Smarcd3Q6P9Z1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcd3Q6P9Z1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcd3Q6P9Z1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcd3Q6P9Z1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcd3Q6P9Z1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcd3Q6P9Z1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Smarcd3Q6P9Z1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcd3Q6P9Z1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcd3Q6P9Z1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smarcd3Q6P9Z1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Smarcd3Q6P9Z1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smarcd3Q6P9Z1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smarcd3Q6P9Z1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Smarcd3Q6P9Z1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd3Q6P9Z1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd3Q6P9Z1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd3Q6P9Z1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd3Q6P9Z1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd3Q6P9Z1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Smarcd3Q6P9Z1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Smarcd3Q6P9Z1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd3Q6P9Z1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd3Q6P9Z1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd3Q6P9Z1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd3Q6P9Z1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd3Q6P9Z1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Smarcd3Q6P9Z1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.75■□□□□ 0.43
Smarcd3Q6P9Z1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd3Q6P9Z1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd3Q6P9Z1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.75■□□□□ 0.43
Smarcd3Q6P9Z1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd3Q6P9Z1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd3Q6P9Z1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd3Q6P9Z1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.75■□□□□ 0.43
Smarcd3Q6P9Z1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd3Q6P9Z1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd3Q6P9Z1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd3Q6P9Z1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd3Q6P9Z1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcd3Q6P9Z1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.74■□□□□ 0.43
Smarcd3Q6P9Z1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcd3Q6P9Z1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Smarcd3Q6P9Z1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Smarcd3Q6P9Z1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Smarcd3Q6P9Z1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
Smarcd3Q6P9Z1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcd3Q6P9Z1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.74■□□□□ 0.43
Smarcd3Q6P9Z1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcd3Q6P9Z1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Smarcd3Q6P9Z1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Smarcd3Q6P9Z1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Smarcd3Q6P9Z1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Smarcd3Q6P9Z1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcd3Q6P9Z1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcd3Q6P9Z1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcd3Q6P9Z1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcd3Q6P9Z1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcd3Q6P9Z1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcd3Q6P9Z1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcd3Q6P9Z1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcd3Q6P9Z1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcd3Q6P9Z1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcd3Q6P9Z1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms