Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Hdac4Q6NZM9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hdac4Q6NZM9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Hdac4Q6NZM9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hdac4Q6NZM9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hdac4Q6NZM9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Hdac4Q6NZM9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hdac4Q6NZM9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.81■■□□□ 1.08
Hdac4Q6NZM9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Hdac4Q6NZM9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hdac4Q6NZM9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Hdac4Q6NZM9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hdac4Q6NZM9 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.8■■□□□ 1.08
Hdac4Q6NZM9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hdac4Q6NZM9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hdac4Q6NZM9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Hdac4Q6NZM9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hdac4Q6NZM9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hdac4Q6NZM9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hdac4Q6NZM9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Hdac4Q6NZM9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.8■■□□□ 1.08
Hdac4Q6NZM9 Mir7075-201ENSMUST00000184187 82 ntBASIC21.8■■□□□ 1.08
Hdac4Q6NZM9 Gm27454-201ENSMUST00000185090 204 ntBASIC21.8■■□□□ 1.08
Hdac4Q6NZM9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hdac4Q6NZM9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Hdac4Q6NZM9 Gm12821-201ENSMUST00000120022 600 ntBASIC21.79■■□□□ 1.08
Hdac4Q6NZM9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.79■■□□□ 1.08
Hdac4Q6NZM9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hdac4Q6NZM9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hdac4Q6NZM9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hdac4Q6NZM9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hdac4Q6NZM9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hdac4Q6NZM9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.79■■□□□ 1.08
Hdac4Q6NZM9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hdac4Q6NZM9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hdac4Q6NZM9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hdac4Q6NZM9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hdac4Q6NZM9 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.78■■□□□ 1.08
Hdac4Q6NZM9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Hdac4Q6NZM9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.78■■□□□ 1.08
Hdac4Q6NZM9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hdac4Q6NZM9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Hdac4Q6NZM9 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.78■■□□□ 1.08
Hdac4Q6NZM9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hdac4Q6NZM9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.78■■□□□ 1.08
Hdac4Q6NZM9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hdac4Q6NZM9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Hdac4Q6NZM9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Hdac4Q6NZM9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Hdac4Q6NZM9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hdac4Q6NZM9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hdac4Q6NZM9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Hdac4Q6NZM9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Hdac4Q6NZM9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hdac4Q6NZM9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.77■■□□□ 1.08
Hdac4Q6NZM9 Gm43173-201ENSMUST00000202246 593 ntBASIC21.77■■□□□ 1.08
Hdac4Q6NZM9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.77■■□□□ 1.08
Hdac4Q6NZM9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Hdac4Q6NZM9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Hdac4Q6NZM9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Hdac4Q6NZM9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hdac4Q6NZM9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.76■■□□□ 1.07
Hdac4Q6NZM9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hdac4Q6NZM9 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.76■■□□□ 1.07
Hdac4Q6NZM9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Hdac4Q6NZM9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hdac4Q6NZM9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hdac4Q6NZM9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hdac4Q6NZM9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Hdac4Q6NZM9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Hdac4Q6NZM9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hdac4Q6NZM9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hdac4Q6NZM9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.75■■□□□ 1.07
Hdac4Q6NZM9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Hdac4Q6NZM9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hdac4Q6NZM9 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.75■■□□□ 1.07
Hdac4Q6NZM9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hdac4Q6NZM9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Hdac4Q6NZM9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hdac4Q6NZM9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hdac4Q6NZM9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.74■■□□□ 1.07
Hdac4Q6NZM9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Hdac4Q6NZM9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hdac4Q6NZM9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hdac4Q6NZM9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
Hdac4Q6NZM9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hdac4Q6NZM9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Hdac4Q6NZM9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hdac4Q6NZM9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hdac4Q6NZM9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Hdac4Q6NZM9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hdac4Q6NZM9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hdac4Q6NZM9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hdac4Q6NZM9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Hdac4Q6NZM9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Hdac4Q6NZM9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hdac4Q6NZM9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hdac4Q6NZM9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hdac4Q6NZM9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Hdac4Q6NZM9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms