Protein–RNA interactions for Protein: Q6A026

Pds5a, Sister chromatid cohesion protein PDS5 homolog A, mousemouse

Predictions only

Length 1,332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5aQ6A026 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.03■□□□□ 0.96
Pds5aQ6A026 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pds5aQ6A026 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pds5aQ6A026 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Pds5aQ6A026 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Pds5aQ6A026 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Pds5aQ6A026 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pds5aQ6A026 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Pds5aQ6A026 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.02■□□□□ 0.95
Pds5aQ6A026 Gm27801-201ENSMUST00000184174 223 ntBASIC21.02■□□□□ 0.95
Pds5aQ6A026 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Pds5aQ6A026 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.01■□□□□ 0.95
Pds5aQ6A026 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Pds5aQ6A026 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.01■□□□□ 0.95
Pds5aQ6A026 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Pds5aQ6A026 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21■□□□□ 0.95
Pds5aQ6A026 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pds5aQ6A026 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pds5aQ6A026 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pds5aQ6A026 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Pds5aQ6A026 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pds5aQ6A026 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pds5aQ6A026 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pds5aQ6A026 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Pds5aQ6A026 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pds5aQ6A026 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pds5aQ6A026 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pds5aQ6A026 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.99■□□□□ 0.95
Pds5aQ6A026 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Pds5aQ6A026 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Pds5aQ6A026 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pds5aQ6A026 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pds5aQ6A026 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pds5aQ6A026 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pds5aQ6A026 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.98■□□□□ 0.95
Pds5aQ6A026 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pds5aQ6A026 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pds5aQ6A026 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.98■□□□□ 0.95
Pds5aQ6A026 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pds5aQ6A026 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pds5aQ6A026 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Pds5aQ6A026 Gm18284-201ENSMUST00000172604 624 ntBASIC20.97■□□□□ 0.95
Pds5aQ6A026 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
Pds5aQ6A026 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Pds5aQ6A026 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pds5aQ6A026 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pds5aQ6A026 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pds5aQ6A026 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pds5aQ6A026 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.96■□□□□ 0.95
Pds5aQ6A026 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pds5aQ6A026 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pds5aQ6A026 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pds5aQ6A026 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.96■□□□□ 0.95
Pds5aQ6A026 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.96■□□□□ 0.95
Pds5aQ6A026 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.96■□□□□ 0.95
Pds5aQ6A026 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Pds5aQ6A026 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.96■□□□□ 0.95
Pds5aQ6A026 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.96■□□□□ 0.95
Pds5aQ6A026 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pds5aQ6A026 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pds5aQ6A026 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pds5aQ6A026 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pds5aQ6A026 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pds5aQ6A026 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Pds5aQ6A026 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
Pds5aQ6A026 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Pds5aQ6A026 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.95■□□□□ 0.94
Pds5aQ6A026 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.95■□□□□ 0.94
Pds5aQ6A026 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.95■□□□□ 0.94
Pds5aQ6A026 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pds5aQ6A026 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pds5aQ6A026 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pds5aQ6A026 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
Pds5aQ6A026 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pds5aQ6A026 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pds5aQ6A026 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pds5aQ6A026 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pds5aQ6A026 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pds5aQ6A026 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pds5aQ6A026 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Pds5aQ6A026 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pds5aQ6A026 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.94■□□□□ 0.94
Pds5aQ6A026 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
Pds5aQ6A026 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.94■□□□□ 0.94
Pds5aQ6A026 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pds5aQ6A026 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pds5aQ6A026 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.94■□□□□ 0.94
Pds5aQ6A026 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pds5aQ6A026 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pds5aQ6A026 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pds5aQ6A026 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pds5aQ6A026 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pds5aQ6A026 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pds5aQ6A026 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pds5aQ6A026 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pds5aQ6A026 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pds5aQ6A026 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Pds5aQ6A026 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pds5aQ6A026 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pds5aQ6A026 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms