Protein–RNA interactions for Protein: Q684R7

Frem1, FRAS1-related extracellular matrix protein 1, mousemouse

Predictions only

Length 2,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frem1Q684R7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17■□□□□ 0.31
Frem1Q684R7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Frem1Q684R7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Frem1Q684R7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Frem1Q684R7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17■□□□□ 0.31
Frem1Q684R7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.99■□□□□ 0.31
Frem1Q684R7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Frem1Q684R7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Frem1Q684R7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Frem1Q684R7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Frem1Q684R7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.99■□□□□ 0.31
Frem1Q684R7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Frem1Q684R7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.99■□□□□ 0.31
Frem1Q684R7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Frem1Q684R7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Frem1Q684R7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Frem1Q684R7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.99■□□□□ 0.31
Frem1Q684R7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Frem1Q684R7 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Frem1Q684R7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Frem1Q684R7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Frem1Q684R7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Frem1Q684R7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Frem1Q684R7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Frem1Q684R7 Gm12441-201ENSMUST00000121806 588 ntBASIC16.98■□□□□ 0.31
Frem1Q684R7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Frem1Q684R7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Frem1Q684R7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Frem1Q684R7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Frem1Q684R7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Frem1Q684R7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Frem1Q684R7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Frem1Q684R7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.98■□□□□ 0.31
Frem1Q684R7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Frem1Q684R7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.97■□□□□ 0.31
Frem1Q684R7 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Frem1Q684R7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Frem1Q684R7 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Frem1Q684R7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Frem1Q684R7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Frem1Q684R7 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Frem1Q684R7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Frem1Q684R7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Frem1Q684R7 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Frem1Q684R7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Frem1Q684R7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Frem1Q684R7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Frem1Q684R7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.96■□□□□ 0.31
Frem1Q684R7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.96■□□□□ 0.31
Frem1Q684R7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Frem1Q684R7 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Frem1Q684R7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Frem1Q684R7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Frem1Q684R7 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Frem1Q684R7 Gm13146-201ENSMUST00000118508 780 ntBASIC16.96■□□□□ 0.31
Frem1Q684R7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.96■□□□□ 0.31
Frem1Q684R7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Frem1Q684R7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Frem1Q684R7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Frem1Q684R7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.95■□□□□ 0.3
Frem1Q684R7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.95■□□□□ 0.3
Frem1Q684R7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.95■□□□□ 0.3
Frem1Q684R7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Frem1Q684R7 AA386476-201ENSMUST00000098781 1665 ntBASIC16.95■□□□□ 0.3
Frem1Q684R7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Frem1Q684R7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Frem1Q684R7 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Frem1Q684R7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Frem1Q684R7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Frem1Q684R7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Frem1Q684R7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.95■□□□□ 0.3
Frem1Q684R7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.95■□□□□ 0.3
Frem1Q684R7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Frem1Q684R7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Frem1Q684R7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Frem1Q684R7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Frem1Q684R7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Frem1Q684R7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.94■□□□□ 0.3
Frem1Q684R7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Frem1Q684R7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Frem1Q684R7 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Frem1Q684R7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Frem1Q684R7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Frem1Q684R7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Frem1Q684R7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Frem1Q684R7 Gm4968-201ENSMUST00000071458 858 ntBASIC16.94■□□□□ 0.3
Frem1Q684R7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Frem1Q684R7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Frem1Q684R7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Frem1Q684R7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Frem1Q684R7 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.93■□□□□ 0.3
Frem1Q684R7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.93■□□□□ 0.3
Frem1Q684R7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Frem1Q684R7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Frem1Q684R7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Frem1Q684R7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Frem1Q684R7 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.93■□□□□ 0.3
Frem1Q684R7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Frem1Q684R7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Frem1Q684R7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms