Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
AtmQ62388 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AtmQ62388 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
AtmQ62388 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
AtmQ62388 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
AtmQ62388 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AtmQ62388 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.69■□□□□ 0.58
AtmQ62388 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.69■□□□□ 0.58
AtmQ62388 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AtmQ62388 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
AtmQ62388 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AtmQ62388 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AtmQ62388 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AtmQ62388 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AtmQ62388 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
AtmQ62388 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AtmQ62388 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AtmQ62388 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AtmQ62388 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AtmQ62388 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AtmQ62388 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AtmQ62388 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AtmQ62388 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AtmQ62388 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.68■□□□□ 0.58
AtmQ62388 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AtmQ62388 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
AtmQ62388 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AtmQ62388 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.68■□□□□ 0.58
AtmQ62388 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AtmQ62388 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AtmQ62388 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AtmQ62388 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AtmQ62388 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AtmQ62388 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
AtmQ62388 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
AtmQ62388 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
AtmQ62388 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
AtmQ62388 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
AtmQ62388 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
AtmQ62388 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
AtmQ62388 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AtmQ62388 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AtmQ62388 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.66■□□□□ 0.58
AtmQ62388 Gm6211-202ENSMUST00000167849 925 ntBASIC18.65■□□□□ 0.58
AtmQ62388 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AtmQ62388 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AtmQ62388 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AtmQ62388 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AtmQ62388 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AtmQ62388 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
AtmQ62388 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AtmQ62388 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.65■□□□□ 0.58
AtmQ62388 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AtmQ62388 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
AtmQ62388 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
AtmQ62388 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
AtmQ62388 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AtmQ62388 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AtmQ62388 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
AtmQ62388 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
AtmQ62388 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
AtmQ62388 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
AtmQ62388 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AtmQ62388 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
AtmQ62388 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
AtmQ62388 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.63■□□□□ 0.57
AtmQ62388 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
AtmQ62388 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.63■□□□□ 0.57
AtmQ62388 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
AtmQ62388 Gm9987-201ENSMUST00000069768 567 ntBASIC18.63■□□□□ 0.57
AtmQ62388 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.63■□□□□ 0.57
AtmQ62388 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.63■□□□□ 0.57
AtmQ62388 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AtmQ62388 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AtmQ62388 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
AtmQ62388 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AtmQ62388 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AtmQ62388 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AtmQ62388 Gm11643-201ENSMUST00000119578 864 ntBASIC18.63■□□□□ 0.57
AtmQ62388 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.62■□□□□ 0.57
AtmQ62388 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
AtmQ62388 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AtmQ62388 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AtmQ62388 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
AtmQ62388 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
AtmQ62388 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.62■□□□□ 0.57
AtmQ62388 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AtmQ62388 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
AtmQ62388 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.61■□□□□ 0.57
AtmQ62388 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.61■□□□□ 0.57
AtmQ62388 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
AtmQ62388 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AtmQ62388 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.61■□□□□ 0.57
AtmQ62388 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AtmQ62388 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AtmQ62388 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
AtmQ62388 Gm38205-201ENSMUST00000192243 258 ntBASIC18.6■□□□□ 0.57
AtmQ62388 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
AtmQ62388 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AtmQ62388 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms