Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Six2Q62232 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Six2Q62232 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Six2Q62232 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Six2Q62232 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Six2Q62232 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Six2Q62232 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Six2Q62232 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Six2Q62232 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Six2Q62232 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Six2Q62232 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Six2Q62232 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Six2Q62232 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Six2Q62232 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Six2Q62232 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Six2Q62232 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Six2Q62232 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Six2Q62232 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Six2Q62232 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.79■□□□□ 0.92
Six2Q62232 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.79■□□□□ 0.92
Six2Q62232 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.79■□□□□ 0.92
Six2Q62232 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Six2Q62232 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.79■□□□□ 0.92
Six2Q62232 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Six2Q62232 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Six2Q62232 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.79■□□□□ 0.92
Six2Q62232 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Six2Q62232 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Six2Q62232 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.78■□□□□ 0.92
Six2Q62232 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Six2Q62232 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Six2Q62232 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Six2Q62232 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.78■□□□□ 0.92
Six2Q62232 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Six2Q62232 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Six2Q62232 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Six2Q62232 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.78■□□□□ 0.92
Six2Q62232 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Six2Q62232 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Six2Q62232 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Six2Q62232 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Six2Q62232 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Six2Q62232 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Six2Q62232 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Six2Q62232 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Six2Q62232 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Six2Q62232 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Six2Q62232 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Six2Q62232 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.77■□□□□ 0.92
Six2Q62232 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Six2Q62232 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
Six2Q62232 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Six2Q62232 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.77■□□□□ 0.92
Six2Q62232 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Six2Q62232 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Six2Q62232 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Six2Q62232 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.76■□□□□ 0.91
Six2Q62232 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Six2Q62232 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Six2Q62232 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Six2Q62232 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Six2Q62232 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Six2Q62232 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Six2Q62232 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Six2Q62232 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Six2Q62232 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Six2Q62232 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Six2Q62232 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Six2Q62232 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Six2Q62232 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Six2Q62232 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Six2Q62232 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.75■□□□□ 0.91
Six2Q62232 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.75■□□□□ 0.91
Six2Q62232 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Six2Q62232 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Six2Q62232 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Six2Q62232 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Six2Q62232 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Six2Q62232 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Six2Q62232 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Six2Q62232 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Six2Q62232 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Six2Q62232 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Six2Q62232 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.74■□□□□ 0.91
Six2Q62232 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Six2Q62232 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Six2Q62232 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Six2Q62232 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Six2Q62232 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Six2Q62232 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Six2Q62232 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Six2Q62232 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Six2Q62232 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Six2Q62232 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Six2Q62232 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Six2Q62232 Mir7075-201ENSMUST00000184187 82 ntBASIC20.73■□□□□ 0.91
Six2Q62232 Gm27454-201ENSMUST00000185090 204 ntBASIC20.73■□□□□ 0.91
Six2Q62232 Gm43173-201ENSMUST00000202246 593 ntBASIC20.73■□□□□ 0.91
Six2Q62232 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Six2Q62232 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms