Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
Six1Q62231 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Six1Q62231 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Six1Q62231 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Six1Q62231 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Six1Q62231 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Six1Q62231 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Six1Q62231 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Six1Q62231 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Six1Q62231 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.03■□□□□ 0.8
Six1Q62231 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Six1Q62231 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.03■□□□□ 0.8
Six1Q62231 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Six1Q62231 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
Six1Q62231 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Six1Q62231 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Six1Q62231 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Six1Q62231 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.02■□□□□ 0.8
Six1Q62231 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Six1Q62231 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Six1Q62231 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.02■□□□□ 0.8
Six1Q62231 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Six1Q62231 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Six1Q62231 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Six1Q62231 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Six1Q62231 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Six1Q62231 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Six1Q62231 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Six1Q62231 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Six1Q62231 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.01■□□□□ 0.79
Six1Q62231 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.01■□□□□ 0.79
Six1Q62231 Serp2-204ENSMUST00000228055 705 ntBASIC20.01■□□□□ 0.79
Six1Q62231 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Six1Q62231 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Six1Q62231 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Six1Q62231 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20■□□□□ 0.79
Six1Q62231 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20■□□□□ 0.79
Six1Q62231 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Six1Q62231 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Six1Q62231 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20■□□□□ 0.79
Six1Q62231 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Six1Q62231 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Six1Q62231 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Six1Q62231 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20■□□□□ 0.79
Six1Q62231 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Six1Q62231 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Six1Q62231 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Six1Q62231 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Six1Q62231 BC021767-201ENSMUST00000126387 1716 ntBASIC19.99■□□□□ 0.79
Six1Q62231 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Six1Q62231 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Six1Q62231 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Six1Q62231 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Six1Q62231 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.99■□□□□ 0.79
Six1Q62231 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Six1Q62231 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Six1Q62231 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Six1Q62231 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Six1Q62231 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Six1Q62231 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Six1Q62231 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Six1Q62231 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Six1Q62231 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Six1Q62231 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Six1Q62231 Golgb1-201ENSMUST00000023534 498 ntBASIC19.98■□□□□ 0.79
Six1Q62231 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Six1Q62231 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Six1Q62231 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Six1Q62231 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Six1Q62231 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Six1Q62231 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six1Q62231 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six1Q62231 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six1Q62231 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.97■□□□□ 0.79
Six1Q62231 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six1Q62231 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six1Q62231 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Six1Q62231 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Six1Q62231 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.96■□□□□ 0.79
Six1Q62231 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six1Q62231 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Six1Q62231 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six1Q62231 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Six1Q62231 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six1Q62231 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Six1Q62231 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six1Q62231 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Six1Q62231 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six1Q62231 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.96■□□□□ 0.79
Six1Q62231 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six1Q62231 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six1Q62231 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.96■□□□□ 0.79
Six1Q62231 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six1Q62231 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six1Q62231 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Six1Q62231 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six1Q62231 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Six1Q62231 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Six1Q62231 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Six1Q62231 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms