Protein–RNA interactions for Protein: Q61068

Usp17la, Ubiquitin carboxyl-terminal hydrolase 17-like protein A, mousemouse

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp17laQ61068 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Usp17laQ61068 Mir5133-201ENSMUST00000174955 77 ntBASIC20.61■□□□□ 0.89
Usp17laQ61068 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.61■□□□□ 0.89
Usp17laQ61068 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.61■□□□□ 0.89
Usp17laQ61068 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Usp17laQ61068 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Usp17laQ61068 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp17laQ61068 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp17laQ61068 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp17laQ61068 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp17laQ61068 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Usp17laQ61068 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp17laQ61068 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.6■□□□□ 0.89
Usp17laQ61068 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp17laQ61068 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.6■□□□□ 0.89
Usp17laQ61068 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp17laQ61068 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Usp17laQ61068 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Usp17laQ61068 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp17laQ61068 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp17laQ61068 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp17laQ61068 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Usp17laQ61068 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Usp17laQ61068 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp17laQ61068 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp17laQ61068 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.58■□□□□ 0.89
Usp17laQ61068 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.58■□□□□ 0.89
Usp17laQ61068 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp17laQ61068 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Usp17laQ61068 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Usp17laQ61068 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.57■□□□□ 0.88
Usp17laQ61068 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Usp17laQ61068 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Usp17laQ61068 Gm13534-201ENSMUST00000121169 513 ntBASIC20.57■□□□□ 0.88
Usp17laQ61068 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.57■□□□□ 0.88
Usp17laQ61068 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.57■□□□□ 0.88
Usp17laQ61068 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp17laQ61068 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp17laQ61068 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.57■□□□□ 0.88
Usp17laQ61068 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.57■□□□□ 0.88
Usp17laQ61068 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp17laQ61068 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp17laQ61068 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Usp17laQ61068 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Usp17laQ61068 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.56■□□□□ 0.88
Usp17laQ61068 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp17laQ61068 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Usp17laQ61068 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Usp17laQ61068 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp17laQ61068 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp17laQ61068 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp17laQ61068 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Usp17laQ61068 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp17laQ61068 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Usp17laQ61068 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp17laQ61068 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Usp17laQ61068 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp17laQ61068 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.54■□□□□ 0.88
Usp17laQ61068 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Usp17laQ61068 Gm6420-201ENSMUST00000193885 723 ntBASIC20.54■□□□□ 0.88
Usp17laQ61068 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.54■□□□□ 0.88
Usp17laQ61068 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp17laQ61068 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Usp17laQ61068 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.54■□□□□ 0.88
Usp17laQ61068 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Usp17laQ61068 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.53■□□□□ 0.88
Usp17laQ61068 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp17laQ61068 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp17laQ61068 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp17laQ61068 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.53■□□□□ 0.88
Usp17laQ61068 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.53■□□□□ 0.88
Usp17laQ61068 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp17laQ61068 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Usp17laQ61068 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.53■□□□□ 0.88
Usp17laQ61068 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp17laQ61068 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp17laQ61068 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp17laQ61068 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Usp17laQ61068 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp17laQ61068 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
Usp17laQ61068 Gm12441-201ENSMUST00000121806 588 ntBASIC20.52■□□□□ 0.88
Usp17laQ61068 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Usp17laQ61068 Gm6365-201ENSMUST00000054711 744 ntBASIC20.52■□□□□ 0.88
Usp17laQ61068 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Usp17laQ61068 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Usp17laQ61068 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Usp17laQ61068 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp17laQ61068 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp17laQ61068 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp17laQ61068 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp17laQ61068 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp17laQ61068 Gm7290-201ENSMUST00000104990 617 ntBASIC20.51■□□□□ 0.87
Usp17laQ61068 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.51■□□□□ 0.87
Usp17laQ61068 Gm12918-201ENSMUST00000120234 636 ntBASIC20.51■□□□□ 0.87
Usp17laQ61068 Gm15710-201ENSMUST00000121821 636 ntBASIC20.51■□□□□ 0.87
Usp17laQ61068 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp17laQ61068 Gm5075-201ENSMUST00000196916 622 ntBASIC20.51■□□□□ 0.87
Usp17laQ61068 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.51■□□□□ 0.87
Usp17laQ61068 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.51■□□□□ 0.87
Usp17laQ61068 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms