Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ClpbQ60649 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ClpbQ60649 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ClpbQ60649 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ClpbQ60649 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ClpbQ60649 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ClpbQ60649 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ClpbQ60649 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.64■□□□□ 0.57
ClpbQ60649 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClpbQ60649 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClpbQ60649 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClpbQ60649 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClpbQ60649 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ClpbQ60649 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ClpbQ60649 Gm12251-201ENSMUST00000117893 792 ntBASIC18.63■□□□□ 0.57
ClpbQ60649 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClpbQ60649 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClpbQ60649 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.63■□□□□ 0.57
ClpbQ60649 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.63■□□□□ 0.57
ClpbQ60649 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClpbQ60649 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ClpbQ60649 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.62■□□□□ 0.57
ClpbQ60649 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ClpbQ60649 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ClpbQ60649 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ClpbQ60649 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ClpbQ60649 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.62■□□□□ 0.57
ClpbQ60649 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ClpbQ60649 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.62■□□□□ 0.57
ClpbQ60649 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ClpbQ60649 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ClpbQ60649 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ClpbQ60649 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ClpbQ60649 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ClpbQ60649 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClpbQ60649 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClpbQ60649 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClpbQ60649 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClpbQ60649 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClpbQ60649 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClpbQ60649 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ClpbQ60649 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ClpbQ60649 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ClpbQ60649 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ClpbQ60649 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ClpbQ60649 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
ClpbQ60649 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ClpbQ60649 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
ClpbQ60649 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.6■□□□□ 0.57
ClpbQ60649 Gm43173-201ENSMUST00000202246 593 ntBASIC18.6■□□□□ 0.57
ClpbQ60649 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ClpbQ60649 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ClpbQ60649 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ClpbQ60649 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.59■□□□□ 0.57
ClpbQ60649 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ClpbQ60649 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ClpbQ60649 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ClpbQ60649 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.59■□□□□ 0.57
ClpbQ60649 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ClpbQ60649 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ClpbQ60649 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ClpbQ60649 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ClpbQ60649 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.59■□□□□ 0.57
ClpbQ60649 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ClpbQ60649 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ClpbQ60649 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ClpbQ60649 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ClpbQ60649 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ClpbQ60649 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ClpbQ60649 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
ClpbQ60649 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ClpbQ60649 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
ClpbQ60649 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.58■□□□□ 0.56
ClpbQ60649 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ClpbQ60649 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ClpbQ60649 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.58■□□□□ 0.56
ClpbQ60649 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ClpbQ60649 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ClpbQ60649 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ClpbQ60649 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ClpbQ60649 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
ClpbQ60649 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ClpbQ60649 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ClpbQ60649 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ClpbQ60649 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ClpbQ60649 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.56■□□□□ 0.56
ClpbQ60649 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.56■□□□□ 0.56
ClpbQ60649 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.56■□□□□ 0.56
ClpbQ60649 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ClpbQ60649 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ClpbQ60649 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.56■□□□□ 0.56
ClpbQ60649 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ClpbQ60649 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ClpbQ60649 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ClpbQ60649 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.56■□□□□ 0.56
ClpbQ60649 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ClpbQ60649 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ClpbQ60649 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.55■□□□□ 0.56
ClpbQ60649 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ClpbQ60649 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms