Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7d-3Q5R1I1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav7d-3Q5R1I1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7d-3Q5R1I1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7d-3Q5R1I1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7d-3Q5R1I1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7d-3Q5R1I1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7d-3Q5R1I1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7d-3Q5R1I1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7d-3Q5R1I1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Trav7d-3Q5R1I1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7d-3Q5R1I1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav7d-3Q5R1I1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7d-3Q5R1I1 Gm22238-201ENSMUST00000175222 88 ntBASIC14.25□□□□□ -0.13
Trav7d-3Q5R1I1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC14.25□□□□□ -0.13
Trav7d-3Q5R1I1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.25□□□□□ -0.13
Trav7d-3Q5R1I1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7d-3Q5R1I1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7d-3Q5R1I1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7d-3Q5R1I1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7d-3Q5R1I1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7d-3Q5R1I1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7d-3Q5R1I1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Trav7d-3Q5R1I1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7d-3Q5R1I1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7d-3Q5R1I1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.24□□□□□ -0.13
Trav7d-3Q5R1I1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.24□□□□□ -0.13
Trav7d-3Q5R1I1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC14.24□□□□□ -0.13
Trav7d-3Q5R1I1 Gm9959-201ENSMUST00000068277 390 ntBASIC14.24□□□□□ -0.13
Trav7d-3Q5R1I1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav7d-3Q5R1I1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7d-3Q5R1I1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7d-3Q5R1I1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7d-3Q5R1I1 Gm6802-201ENSMUST00000167843 1983 ntBASIC14.23□□□□□ -0.13
Trav7d-3Q5R1I1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
Trav7d-3Q5R1I1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav7d-3Q5R1I1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav7d-3Q5R1I1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav7d-3Q5R1I1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav7d-3Q5R1I1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav7d-3Q5R1I1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav7d-3Q5R1I1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav7d-3Q5R1I1 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.23□□□□□ -0.13
Trav7d-3Q5R1I1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav7d-3Q5R1I1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav7d-3Q5R1I1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav7d-3Q5R1I1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav7d-3Q5R1I1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav7d-3Q5R1I1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav7d-3Q5R1I1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav7d-3Q5R1I1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7d-3Q5R1I1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7d-3Q5R1I1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7d-3Q5R1I1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7d-3Q5R1I1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7d-3Q5R1I1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav7d-3Q5R1I1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC14.22□□□□□ -0.13
Trav7d-3Q5R1I1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7d-3Q5R1I1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav7d-3Q5R1I1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav7d-3Q5R1I1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7d-3Q5R1I1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7d-3Q5R1I1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7d-3Q5R1I1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7d-3Q5R1I1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav7d-3Q5R1I1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav7d-3Q5R1I1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav7d-3Q5R1I1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav7d-3Q5R1I1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav7d-3Q5R1I1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Trav7d-3Q5R1I1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav7d-3Q5R1I1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav7d-3Q5R1I1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav7d-3Q5R1I1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.21□□□□□ -0.13
Trav7d-3Q5R1I1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav7d-3Q5R1I1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trav7d-3Q5R1I1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trav7d-3Q5R1I1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
Trav7d-3Q5R1I1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7d-3Q5R1I1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7d-3Q5R1I1 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7d-3Q5R1I1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7d-3Q5R1I1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav7d-3Q5R1I1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav7d-3Q5R1I1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.2□□□□□ -0.14
Trav7d-3Q5R1I1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav7d-3Q5R1I1 AC093043.1-201ENSMUST00000226700 898 ntBASIC14.2□□□□□ -0.14
Trav7d-3Q5R1I1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7d-3Q5R1I1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7d-3Q5R1I1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7d-3Q5R1I1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7d-3Q5R1I1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7d-3Q5R1I1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7d-3Q5R1I1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav7d-3Q5R1I1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav7d-3Q5R1I1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav7d-3Q5R1I1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav7d-3Q5R1I1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav7d-3Q5R1I1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav7d-3Q5R1I1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms