Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Bdp1Q571C7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
Bdp1Q571C7 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Bdp1Q571C7 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Bdp1Q571C7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Bdp1Q571C7 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Bdp1Q571C7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Bdp1Q571C7 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.08■□□□□ 0.8
Bdp1Q571C7 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Bdp1Q571C7 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Bdp1Q571C7 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.07■□□□□ 0.8
Bdp1Q571C7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.07■□□□□ 0.8
Bdp1Q571C7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.07■□□□□ 0.8
Bdp1Q571C7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Bdp1Q571C7 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.07■□□□□ 0.8
Bdp1Q571C7 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Bdp1Q571C7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Bdp1Q571C7 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Bdp1Q571C7 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Bdp1Q571C7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
Bdp1Q571C7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Bdp1Q571C7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Bdp1Q571C7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Bdp1Q571C7 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Bdp1Q571C7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Bdp1Q571C7 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.05■□□□□ 0.8
Bdp1Q571C7 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Bdp1Q571C7 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.05■□□□□ 0.8
Bdp1Q571C7 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.05■□□□□ 0.8
Bdp1Q571C7 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Bdp1Q571C7 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Bdp1Q571C7 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Bdp1Q571C7 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Bdp1Q571C7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Bdp1Q571C7 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC20.04■□□□□ 0.8
Bdp1Q571C7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Bdp1Q571C7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Bdp1Q571C7 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.04■□□□□ 0.8
Bdp1Q571C7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Bdp1Q571C7 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Bdp1Q571C7 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Bdp1Q571C7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Bdp1Q571C7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.04■□□□□ 0.8
Bdp1Q571C7 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Bdp1Q571C7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.04■□□□□ 0.8
Bdp1Q571C7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Bdp1Q571C7 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Bdp1Q571C7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Bdp1Q571C7 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.04■□□□□ 0.8
Bdp1Q571C7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Bdp1Q571C7 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Bdp1Q571C7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Bdp1Q571C7 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.03■□□□□ 0.8
Bdp1Q571C7 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Bdp1Q571C7 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Bdp1Q571C7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Bdp1Q571C7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Bdp1Q571C7 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Bdp1Q571C7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Bdp1Q571C7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Bdp1Q571C7 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Bdp1Q571C7 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Bdp1Q571C7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Bdp1Q571C7 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.02■□□□□ 0.8
Bdp1Q571C7 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Bdp1Q571C7 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Bdp1Q571C7 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Bdp1Q571C7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Bdp1Q571C7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Bdp1Q571C7 Gm25925-201ENSMUST00000158314 306 ntBASIC20.02■□□□□ 0.8
Bdp1Q571C7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.02■□□□□ 0.8
Bdp1Q571C7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Bdp1Q571C7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Bdp1Q571C7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.02■□□□□ 0.79
Bdp1Q571C7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.79
Bdp1Q571C7 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Bdp1Q571C7 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Bdp1Q571C7 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Bdp1Q571C7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Bdp1Q571C7 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Bdp1Q571C7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.01■□□□□ 0.79
Bdp1Q571C7 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.01■□□□□ 0.79
Bdp1Q571C7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Bdp1Q571C7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Bdp1Q571C7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Bdp1Q571C7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Bdp1Q571C7 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Bdp1Q571C7 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20■□□□□ 0.79
Bdp1Q571C7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
Bdp1Q571C7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
Bdp1Q571C7 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Bdp1Q571C7 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Bdp1Q571C7 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Bdp1Q571C7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Bdp1Q571C7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Bdp1Q571C7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20■□□□□ 0.79
Bdp1Q571C7 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Bdp1Q571C7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Bdp1Q571C7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Bdp1Q571C7 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms