Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Spire1Q52KF3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Spire1Q52KF3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Spire1Q52KF3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Spire1Q52KF3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Spire1Q52KF3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Spire1Q52KF3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Spire1Q52KF3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.91■□□□□ 0.78
Spire1Q52KF3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Spire1Q52KF3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Spire1Q52KF3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Spire1Q52KF3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.91■□□□□ 0.78
Spire1Q52KF3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Spire1Q52KF3 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.91■□□□□ 0.78
Spire1Q52KF3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Spire1Q52KF3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Spire1Q52KF3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Spire1Q52KF3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Spire1Q52KF3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Spire1Q52KF3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Spire1Q52KF3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.9■□□□□ 0.78
Spire1Q52KF3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Spire1Q52KF3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.9■□□□□ 0.78
Spire1Q52KF3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Spire1Q52KF3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.9■□□□□ 0.78
Spire1Q52KF3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Spire1Q52KF3 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.9■□□□□ 0.78
Spire1Q52KF3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Spire1Q52KF3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Spire1Q52KF3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Spire1Q52KF3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Spire1Q52KF3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Spire1Q52KF3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Spire1Q52KF3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Spire1Q52KF3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
Spire1Q52KF3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Spire1Q52KF3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.89■□□□□ 0.77
Spire1Q52KF3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.89■□□□□ 0.77
Spire1Q52KF3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.89■□□□□ 0.77
Spire1Q52KF3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Spire1Q52KF3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Spire1Q52KF3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Spire1Q52KF3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Spire1Q52KF3 Gm4968-201ENSMUST00000071458 858 ntBASIC19.89■□□□□ 0.77
Spire1Q52KF3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Spire1Q52KF3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Spire1Q52KF3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Spire1Q52KF3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Spire1Q52KF3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Spire1Q52KF3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Spire1Q52KF3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Spire1Q52KF3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Spire1Q52KF3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Spire1Q52KF3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.88■□□□□ 0.77
Spire1Q52KF3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Spire1Q52KF3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Spire1Q52KF3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.87■□□□□ 0.77
Spire1Q52KF3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Spire1Q52KF3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.87■□□□□ 0.77
Spire1Q52KF3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Spire1Q52KF3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Spire1Q52KF3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.87■□□□□ 0.77
Spire1Q52KF3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Spire1Q52KF3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Spire1Q52KF3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Spire1Q52KF3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.87■□□□□ 0.77
Spire1Q52KF3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Spire1Q52KF3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.87■□□□□ 0.77
Spire1Q52KF3 Gm6365-201ENSMUST00000054711 744 ntBASIC19.87■□□□□ 0.77
Spire1Q52KF3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Spire1Q52KF3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.87■□□□□ 0.77
Spire1Q52KF3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Spire1Q52KF3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Spire1Q52KF3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Spire1Q52KF3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Spire1Q52KF3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Spire1Q52KF3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Spire1Q52KF3 Gm6420-201ENSMUST00000193885 723 ntBASIC19.86■□□□□ 0.77
Spire1Q52KF3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.86■□□□□ 0.77
Spire1Q52KF3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.86■□□□□ 0.77
Spire1Q52KF3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Spire1Q52KF3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Spire1Q52KF3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.85■□□□□ 0.77
Spire1Q52KF3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Spire1Q52KF3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Spire1Q52KF3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Spire1Q52KF3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.85■□□□□ 0.77
Spire1Q52KF3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Spire1Q52KF3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Spire1Q52KF3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Spire1Q52KF3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Spire1Q52KF3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Spire1Q52KF3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Spire1Q52KF3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Spire1Q52KF3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Spire1Q52KF3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Spire1Q52KF3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Spire1Q52KF3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.84■□□□□ 0.77
Spire1Q52KF3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Spire1Q52KF3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms