Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Herc2Q4U2R1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Herc2Q4U2R1 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Herc2Q4U2R1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Herc2Q4U2R1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC11.88□□□□□ -0.51
Herc2Q4U2R1 Gm11539-201ENSMUST00000119837 557 ntBASIC11.88□□□□□ -0.51
Herc2Q4U2R1 Gm13436-201ENSMUST00000120418 567 ntBASIC11.88□□□□□ -0.51
Herc2Q4U2R1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Herc2Q4U2R1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Herc2Q4U2R1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Herc2Q4U2R1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Herc2Q4U2R1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Herc2Q4U2R1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Herc2Q4U2R1 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Herc2Q4U2R1 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Herc2Q4U2R1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Herc2Q4U2R1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Herc2Q4U2R1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Herc2Q4U2R1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Herc2Q4U2R1 Gm21596-201ENSMUST00000178049 1316 ntBASIC11.87□□□□□ -0.51
Herc2Q4U2R1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Herc2Q4U2R1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC11.87□□□□□ -0.51
Herc2Q4U2R1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Herc2Q4U2R1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Herc2Q4U2R1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Herc2Q4U2R1 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Herc2Q4U2R1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Herc2Q4U2R1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Herc2Q4U2R1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC11.87□□□□□ -0.51
Herc2Q4U2R1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Herc2Q4U2R1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Herc2Q4U2R1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Herc2Q4U2R1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Herc2Q4U2R1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Herc2Q4U2R1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.86□□□□□ -0.51
Herc2Q4U2R1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Herc2Q4U2R1 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.86□□□□□ -0.51
Herc2Q4U2R1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Herc2Q4U2R1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Herc2Q4U2R1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Herc2Q4U2R1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC11.86□□□□□ -0.51
Herc2Q4U2R1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Herc2Q4U2R1 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Herc2Q4U2R1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Herc2Q4U2R1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Herc2Q4U2R1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Herc2Q4U2R1 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Herc2Q4U2R1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC11.86□□□□□ -0.51
Herc2Q4U2R1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Herc2Q4U2R1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Herc2Q4U2R1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Herc2Q4U2R1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Herc2Q4U2R1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Herc2Q4U2R1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Herc2Q4U2R1 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Herc2Q4U2R1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Herc2Q4U2R1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Herc2Q4U2R1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Herc2Q4U2R1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Herc2Q4U2R1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Herc2Q4U2R1 Gm18666-201ENSMUST00000190039 958 ntBASIC11.85□□□□□ -0.51
Herc2Q4U2R1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Herc2Q4U2R1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Herc2Q4U2R1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Herc2Q4U2R1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Herc2Q4U2R1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Herc2Q4U2R1 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Herc2Q4U2R1 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Herc2Q4U2R1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Herc2Q4U2R1 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Herc2Q4U2R1 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Herc2Q4U2R1 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Herc2Q4U2R1 Gm42699-201ENSMUST00000198104 1657 ntBASIC11.84□□□□□ -0.51
Herc2Q4U2R1 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Herc2Q4U2R1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Herc2Q4U2R1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Herc2Q4U2R1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Herc2Q4U2R1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC11.84□□□□□ -0.51
Herc2Q4U2R1 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Herc2Q4U2R1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Herc2Q4U2R1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Herc2Q4U2R1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC11.84□□□□□ -0.51
Herc2Q4U2R1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Herc2Q4U2R1 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Herc2Q4U2R1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Herc2Q4U2R1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC11.83□□□□□ -0.51
Herc2Q4U2R1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Herc2Q4U2R1 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Herc2Q4U2R1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Herc2Q4U2R1 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Herc2Q4U2R1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Herc2Q4U2R1 Gm13559-201ENSMUST00000120476 863 ntBASIC11.83□□□□□ -0.52
Herc2Q4U2R1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC11.83□□□□□ -0.52
Herc2Q4U2R1 Gm10013-201ENSMUST00000106074 672 ntBASIC11.83□□□□□ -0.52
Herc2Q4U2R1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Herc2Q4U2R1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Herc2Q4U2R1 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Herc2Q4U2R1 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Herc2Q4U2R1 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC11.83□□□□□ -0.52
Herc2Q4U2R1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms