Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tmem40Q4FJU9 Gm9988-201ENSMUST00000069786 435 ntBASIC16.55■□□□□ 0.24
Tmem40Q4FJU9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Tmem40Q4FJU9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tmem40Q4FJU9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.55■□□□□ 0.24
Tmem40Q4FJU9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tmem40Q4FJU9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tmem40Q4FJU9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tmem40Q4FJU9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Tmem40Q4FJU9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Tmem40Q4FJU9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Tmem40Q4FJU9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tmem40Q4FJU9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tmem40Q4FJU9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tmem40Q4FJU9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Tmem40Q4FJU9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tmem40Q4FJU9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.54■□□□□ 0.24
Tmem40Q4FJU9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Tmem40Q4FJU9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.54■□□□□ 0.24
Tmem40Q4FJU9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.54■□□□□ 0.24
Tmem40Q4FJU9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tmem40Q4FJU9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Tmem40Q4FJU9 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.54■□□□□ 0.24
Tmem40Q4FJU9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Tmem40Q4FJU9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Tmem40Q4FJU9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Tmem40Q4FJU9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Tmem40Q4FJU9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.53■□□□□ 0.24
Tmem40Q4FJU9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.53■□□□□ 0.24
Tmem40Q4FJU9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Tmem40Q4FJU9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Tmem40Q4FJU9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tmem40Q4FJU9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Tmem40Q4FJU9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Tmem40Q4FJU9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tmem40Q4FJU9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tmem40Q4FJU9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Tmem40Q4FJU9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Tmem40Q4FJU9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Tmem40Q4FJU9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.52■□□□□ 0.24
Tmem40Q4FJU9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tmem40Q4FJU9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Tmem40Q4FJU9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Tmem40Q4FJU9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Tmem40Q4FJU9 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC16.52■□□□□ 0.24
Tmem40Q4FJU9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.52■□□□□ 0.24
Tmem40Q4FJU9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tmem40Q4FJU9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tmem40Q4FJU9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tmem40Q4FJU9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tmem40Q4FJU9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tmem40Q4FJU9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tmem40Q4FJU9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tmem40Q4FJU9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tmem40Q4FJU9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tmem40Q4FJU9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tmem40Q4FJU9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.51■□□□□ 0.23
Tmem40Q4FJU9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tmem40Q4FJU9 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.51■□□□□ 0.23
Tmem40Q4FJU9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.51■□□□□ 0.23
Tmem40Q4FJU9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.51■□□□□ 0.23
Tmem40Q4FJU9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.51■□□□□ 0.23
Tmem40Q4FJU9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tmem40Q4FJU9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.51■□□□□ 0.23
Tmem40Q4FJU9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Tmem40Q4FJU9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Tmem40Q4FJU9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tmem40Q4FJU9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tmem40Q4FJU9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tmem40Q4FJU9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tmem40Q4FJU9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tmem40Q4FJU9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tmem40Q4FJU9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tmem40Q4FJU9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tmem40Q4FJU9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
Tmem40Q4FJU9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Tmem40Q4FJU9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Tmem40Q4FJU9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tmem40Q4FJU9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Tmem40Q4FJU9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Tmem40Q4FJU9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tmem40Q4FJU9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tmem40Q4FJU9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tmem40Q4FJU9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tmem40Q4FJU9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tmem40Q4FJU9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tmem40Q4FJU9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tmem40Q4FJU9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tmem40Q4FJU9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tmem40Q4FJU9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tmem40Q4FJU9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tmem40Q4FJU9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tmem40Q4FJU9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.48■□□□□ 0.23
Tmem40Q4FJU9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tmem40Q4FJU9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tmem40Q4FJU9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tmem40Q4FJU9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tmem40Q4FJU9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.48■□□□□ 0.23
Tmem40Q4FJU9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Tmem40Q4FJU9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms