Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lin28bQ45KJ6 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.53■□□□□ 0.56
Lin28bQ45KJ6 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lin28bQ45KJ6 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.53■□□□□ 0.56
Lin28bQ45KJ6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lin28bQ45KJ6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lin28bQ45KJ6 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lin28bQ45KJ6 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lin28bQ45KJ6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lin28bQ45KJ6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lin28bQ45KJ6 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lin28bQ45KJ6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lin28bQ45KJ6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Lin28bQ45KJ6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lin28bQ45KJ6 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lin28bQ45KJ6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lin28bQ45KJ6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lin28bQ45KJ6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.52■□□□□ 0.56
Lin28bQ45KJ6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lin28bQ45KJ6 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Lin28bQ45KJ6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Lin28bQ45KJ6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lin28bQ45KJ6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lin28bQ45KJ6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.52■□□□□ 0.55
Lin28bQ45KJ6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lin28bQ45KJ6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lin28bQ45KJ6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Lin28bQ45KJ6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Lin28bQ45KJ6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Lin28bQ45KJ6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Lin28bQ45KJ6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lin28bQ45KJ6 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.51■□□□□ 0.55
Lin28bQ45KJ6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lin28bQ45KJ6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lin28bQ45KJ6 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lin28bQ45KJ6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lin28bQ45KJ6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lin28bQ45KJ6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.5■□□□□ 0.55
Lin28bQ45KJ6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lin28bQ45KJ6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lin28bQ45KJ6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lin28bQ45KJ6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.5■□□□□ 0.55
Lin28bQ45KJ6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lin28bQ45KJ6 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lin28bQ45KJ6 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.5■□□□□ 0.55
Lin28bQ45KJ6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lin28bQ45KJ6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lin28bQ45KJ6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.5■□□□□ 0.55
Lin28bQ45KJ6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Lin28bQ45KJ6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lin28bQ45KJ6 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.49■□□□□ 0.55
Lin28bQ45KJ6 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lin28bQ45KJ6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lin28bQ45KJ6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lin28bQ45KJ6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lin28bQ45KJ6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lin28bQ45KJ6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lin28bQ45KJ6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lin28bQ45KJ6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lin28bQ45KJ6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lin28bQ45KJ6 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lin28bQ45KJ6 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lin28bQ45KJ6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lin28bQ45KJ6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Lin28bQ45KJ6 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.48■□□□□ 0.55
Lin28bQ45KJ6 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.48■□□□□ 0.55
Lin28bQ45KJ6 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lin28bQ45KJ6 Gm10602-201ENSMUST00000098239 609 ntBASIC18.48■□□□□ 0.55
Lin28bQ45KJ6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lin28bQ45KJ6 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lin28bQ45KJ6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lin28bQ45KJ6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lin28bQ45KJ6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lin28bQ45KJ6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lin28bQ45KJ6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lin28bQ45KJ6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Lin28bQ45KJ6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Lin28bQ45KJ6 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lin28bQ45KJ6 Gm7514-201ENSMUST00000209475 934 ntBASIC18.47■□□□□ 0.55
Lin28bQ45KJ6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lin28bQ45KJ6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Lin28bQ45KJ6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lin28bQ45KJ6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lin28bQ45KJ6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lin28bQ45KJ6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lin28bQ45KJ6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Lin28bQ45KJ6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Lin28bQ45KJ6 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.46■□□□□ 0.55
Lin28bQ45KJ6 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lin28bQ45KJ6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Lin28bQ45KJ6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lin28bQ45KJ6 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lin28bQ45KJ6 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.46■□□□□ 0.55
Lin28bQ45KJ6 Gm27011-201ENSMUST00000182352 972 ntBASIC18.46■□□□□ 0.55
Lin28bQ45KJ6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lin28bQ45KJ6 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lin28bQ45KJ6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Lin28bQ45KJ6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lin28bQ45KJ6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.46■□□□□ 0.55
Lin28bQ45KJ6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms