Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.96■□□□□ 0.63
Rnf223Q3UV31 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Rnf223Q3UV31 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Rnf223Q3UV31 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf223Q3UV31 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf223Q3UV31 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf223Q3UV31 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf223Q3UV31 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Rnf223Q3UV31 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf223Q3UV31 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf223Q3UV31 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Rnf223Q3UV31 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.95■□□□□ 0.62
Rnf223Q3UV31 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.95■□□□□ 0.62
Rnf223Q3UV31 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.95■□□□□ 0.62
Rnf223Q3UV31 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf223Q3UV31 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Rnf223Q3UV31 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.95■□□□□ 0.62
Rnf223Q3UV31 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Rnf223Q3UV31 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf223Q3UV31 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf223Q3UV31 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf223Q3UV31 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf223Q3UV31 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf223Q3UV31 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf223Q3UV31 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Rnf223Q3UV31 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf223Q3UV31 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf223Q3UV31 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf223Q3UV31 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.94■□□□□ 0.62
Rnf223Q3UV31 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf223Q3UV31 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.94■□□□□ 0.62
Rnf223Q3UV31 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf223Q3UV31 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.93■□□□□ 0.62
Rnf223Q3UV31 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
Rnf223Q3UV31 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf223Q3UV31 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.93■□□□□ 0.62
Rnf223Q3UV31 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf223Q3UV31 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf223Q3UV31 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Rnf223Q3UV31 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf223Q3UV31 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf223Q3UV31 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf223Q3UV31 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.92■□□□□ 0.62
Rnf223Q3UV31 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf223Q3UV31 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Rnf223Q3UV31 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Rnf223Q3UV31 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.92■□□□□ 0.62
Rnf223Q3UV31 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf223Q3UV31 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf223Q3UV31 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf223Q3UV31 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf223Q3UV31 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Rnf223Q3UV31 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.91■□□□□ 0.62
Rnf223Q3UV31 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Rnf223Q3UV31 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf223Q3UV31 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf223Q3UV31 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf223Q3UV31 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
Rnf223Q3UV31 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf223Q3UV31 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.91■□□□□ 0.62
Rnf223Q3UV31 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.9■□□□□ 0.62
Rnf223Q3UV31 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.9■□□□□ 0.62
Rnf223Q3UV31 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf223Q3UV31 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf223Q3UV31 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.9■□□□□ 0.62
Rnf223Q3UV31 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Rnf223Q3UV31 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf223Q3UV31 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf223Q3UV31 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf223Q3UV31 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf223Q3UV31 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.9■□□□□ 0.62
Rnf223Q3UV31 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf223Q3UV31 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf223Q3UV31 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Rnf223Q3UV31 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf223Q3UV31 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rnf223Q3UV31 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf223Q3UV31 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.89■□□□□ 0.61
Rnf223Q3UV31 Gm37179-201ENSMUST00000194862 823 ntBASIC18.89■□□□□ 0.61
Rnf223Q3UV31 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.89■□□□□ 0.61
Rnf223Q3UV31 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.89■□□□□ 0.61
Rnf223Q3UV31 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf223Q3UV31 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf223Q3UV31 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Rnf223Q3UV31 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf223Q3UV31 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Rnf223Q3UV31 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rnf223Q3UV31 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf223Q3UV31 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf223Q3UV31 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.88■□□□□ 0.61
Rnf223Q3UV31 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf223Q3UV31 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf223Q3UV31 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Rnf223Q3UV31 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf223Q3UV31 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf223Q3UV31 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Rnf223Q3UV31 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf223Q3UV31 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf223Q3UV31 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Rnf223Q3UV31 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms