Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col19a1Q0VF58 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col19a1Q0VF58 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col19a1Q0VF58 Gm10819-201ENSMUST00000099988 561 ntBASIC21.03■□□□□ 0.96
Col19a1Q0VF58 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.02■□□□□ 0.96
Col19a1Q0VF58 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col19a1Q0VF58 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.02■□□□□ 0.96
Col19a1Q0VF58 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.02■□□□□ 0.96
Col19a1Q0VF58 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Col19a1Q0VF58 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Col19a1Q0VF58 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Col19a1Q0VF58 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col19a1Q0VF58 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Col19a1Q0VF58 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col19a1Q0VF58 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col19a1Q0VF58 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.01■□□□□ 0.95
Col19a1Q0VF58 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col19a1Q0VF58 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Col19a1Q0VF58 Gm10698-201ENSMUST00000182663 604 ntBASIC21.01■□□□□ 0.95
Col19a1Q0VF58 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC21.01■□□□□ 0.95
Col19a1Q0VF58 AC153881.2-201ENSMUST00000214877 204 ntBASIC21.01■□□□□ 0.95
Col19a1Q0VF58 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col19a1Q0VF58 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.01■□□□□ 0.95
Col19a1Q0VF58 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21■□□□□ 0.95
Col19a1Q0VF58 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col19a1Q0VF58 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col19a1Q0VF58 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
Col19a1Q0VF58 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.99■□□□□ 0.95
Col19a1Q0VF58 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col19a1Q0VF58 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Col19a1Q0VF58 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.99■□□□□ 0.95
Col19a1Q0VF58 Gm2559-201ENSMUST00000201323 363 ntBASIC20.99■□□□□ 0.95
Col19a1Q0VF58 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col19a1Q0VF58 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Col19a1Q0VF58 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.99■□□□□ 0.95
Col19a1Q0VF58 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Col19a1Q0VF58 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col19a1Q0VF58 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col19a1Q0VF58 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col19a1Q0VF58 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col19a1Q0VF58 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Col19a1Q0VF58 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Col19a1Q0VF58 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col19a1Q0VF58 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col19a1Q0VF58 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Col19a1Q0VF58 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col19a1Q0VF58 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Col19a1Q0VF58 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.98■□□□□ 0.95
Col19a1Q0VF58 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col19a1Q0VF58 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Col19a1Q0VF58 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col19a1Q0VF58 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.98■□□□□ 0.95
Col19a1Q0VF58 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Col19a1Q0VF58 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Col19a1Q0VF58 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.97■□□□□ 0.95
Col19a1Q0VF58 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col19a1Q0VF58 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col19a1Q0VF58 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.97■□□□□ 0.95
Col19a1Q0VF58 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.97■□□□□ 0.95
Col19a1Q0VF58 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Col19a1Q0VF58 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col19a1Q0VF58 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.97■□□□□ 0.95
Col19a1Q0VF58 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col19a1Q0VF58 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col19a1Q0VF58 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Col19a1Q0VF58 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col19a1Q0VF58 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col19a1Q0VF58 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col19a1Q0VF58 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.96■□□□□ 0.95
Col19a1Q0VF58 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.96■□□□□ 0.95
Col19a1Q0VF58 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col19a1Q0VF58 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.96■□□□□ 0.95
Col19a1Q0VF58 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Col19a1Q0VF58 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Col19a1Q0VF58 Dio3-201ENSMUST00000097228 1449 ntBASIC20.95■□□□□ 0.95
Col19a1Q0VF58 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col19a1Q0VF58 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col19a1Q0VF58 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col19a1Q0VF58 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col19a1Q0VF58 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col19a1Q0VF58 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.95■□□□□ 0.94
Col19a1Q0VF58 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col19a1Q0VF58 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.95■□□□□ 0.94
Col19a1Q0VF58 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.95■□□□□ 0.94
Col19a1Q0VF58 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col19a1Q0VF58 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Col19a1Q0VF58 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col19a1Q0VF58 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col19a1Q0VF58 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col19a1Q0VF58 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col19a1Q0VF58 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col19a1Q0VF58 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.94■□□□□ 0.94
Col19a1Q0VF58 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.94■□□□□ 0.94
Col19a1Q0VF58 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col19a1Q0VF58 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col19a1Q0VF58 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col19a1Q0VF58 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Col19a1Q0VF58 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col19a1Q0VF58 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.94■□□□□ 0.94
Col19a1Q0VF58 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms