Protein–RNA interactions for Protein: Q04519

Smpd1, Sphingomyelin phosphodiesterase, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smpd1Q04519 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smpd1Q04519 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smpd1Q04519 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smpd1Q04519 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smpd1Q04519 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Smpd1Q04519 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.67■□□□□ 0.9
Smpd1Q04519 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smpd1Q04519 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Smpd1Q04519 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smpd1Q04519 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smpd1Q04519 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Smpd1Q04519 Gm37444-201ENSMUST00000193605 439 ntBASIC20.66■□□□□ 0.9
Smpd1Q04519 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.66■□□□□ 0.9
Smpd1Q04519 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.66■□□□□ 0.9
Smpd1Q04519 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.66■□□□□ 0.9
Smpd1Q04519 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smpd1Q04519 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smpd1Q04519 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Smpd1Q04519 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smpd1Q04519 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smpd1Q04519 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smpd1Q04519 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smpd1Q04519 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smpd1Q04519 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Smpd1Q04519 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smpd1Q04519 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smpd1Q04519 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.65■□□□□ 0.9
Smpd1Q04519 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smpd1Q04519 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smpd1Q04519 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smpd1Q04519 Mir5133-201ENSMUST00000174955 77 ntBASIC20.65■□□□□ 0.9
Smpd1Q04519 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.65■□□□□ 0.9
Smpd1Q04519 Gm6420-201ENSMUST00000193885 723 ntBASIC20.65■□□□□ 0.9
Smpd1Q04519 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.65■□□□□ 0.9
Smpd1Q04519 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smpd1Q04519 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smpd1Q04519 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smpd1Q04519 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Smpd1Q04519 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Smpd1Q04519 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Smpd1Q04519 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Smpd1Q04519 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Smpd1Q04519 Gm13534-201ENSMUST00000121169 513 ntBASIC20.64■□□□□ 0.89
Smpd1Q04519 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smpd1Q04519 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.64■□□□□ 0.89
Smpd1Q04519 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smpd1Q04519 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smpd1Q04519 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smpd1Q04519 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.63■□□□□ 0.89
Smpd1Q04519 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smpd1Q04519 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smpd1Q04519 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smpd1Q04519 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smpd1Q04519 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smpd1Q04519 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smpd1Q04519 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smpd1Q04519 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Smpd1Q04519 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.62■□□□□ 0.89
Smpd1Q04519 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.62■□□□□ 0.89
Smpd1Q04519 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smpd1Q04519 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Smpd1Q04519 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Smpd1Q04519 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smpd1Q04519 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Smpd1Q04519 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smpd1Q04519 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smpd1Q04519 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smpd1Q04519 Gm13148-201ENSMUST00000118892 745 ntBASIC20.61■□□□□ 0.89
Smpd1Q04519 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smpd1Q04519 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.61■□□□□ 0.89
Smpd1Q04519 Nespas-201ENSMUST00000143738 1083 ntBASIC20.61■□□□□ 0.89
Smpd1Q04519 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.61■□□□□ 0.89
Smpd1Q04519 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smpd1Q04519 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smpd1Q04519 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.61■□□□□ 0.89
Smpd1Q04519 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smpd1Q04519 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Smpd1Q04519 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smpd1Q04519 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.6■□□□□ 0.89
Smpd1Q04519 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Smpd1Q04519 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Smpd1Q04519 Gm12441-201ENSMUST00000121806 588 ntBASIC20.6■□□□□ 0.89
Smpd1Q04519 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Smpd1Q04519 Gm6365-201ENSMUST00000054711 744 ntBASIC20.6■□□□□ 0.89
Smpd1Q04519 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Smpd1Q04519 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smpd1Q04519 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smpd1Q04519 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smpd1Q04519 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smpd1Q04519 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.59■□□□□ 0.89
Smpd1Q04519 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Smpd1Q04519 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.59■□□□□ 0.89
Smpd1Q04519 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smpd1Q04519 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.59■□□□□ 0.89
Smpd1Q04519 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Smpd1Q04519 Gm4968-201ENSMUST00000071458 858 ntBASIC20.59■□□□□ 0.89
Smpd1Q04519 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smpd1Q04519 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smpd1Q04519 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smpd1Q04519 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms