Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx3-2P97503 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.31■□□□□ 0.52
Nkx3-2P97503 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.31■□□□□ 0.52
Nkx3-2P97503 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx3-2P97503 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx3-2P97503 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx3-2P97503 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx3-2P97503 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Nkx3-2P97503 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx3-2P97503 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx3-2P97503 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx3-2P97503 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Nkx3-2P97503 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Nkx3-2P97503 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx3-2P97503 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx3-2P97503 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx3-2P97503 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.3■□□□□ 0.52
Nkx3-2P97503 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx3-2P97503 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx3-2P97503 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx3-2P97503 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx3-2P97503 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Nkx3-2P97503 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Nkx3-2P97503 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx3-2P97503 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx3-2P97503 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx3-2P97503 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx3-2P97503 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Nkx3-2P97503 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx3-2P97503 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx3-2P97503 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx3-2P97503 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.29■□□□□ 0.52
Nkx3-2P97503 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx3-2P97503 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx3-2P97503 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx3-2P97503 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx3-2P97503 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx3-2P97503 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Nkx3-2P97503 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Nkx3-2P97503 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.28■□□□□ 0.52
Nkx3-2P97503 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx3-2P97503 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx3-2P97503 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.28■□□□□ 0.52
Nkx3-2P97503 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx3-2P97503 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx3-2P97503 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Nkx3-2P97503 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.27■□□□□ 0.52
Nkx3-2P97503 Gm42642-201ENSMUST00000200683 355 ntBASIC18.27■□□□□ 0.52
Nkx3-2P97503 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.27■□□□□ 0.52
Nkx3-2P97503 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nkx3-2P97503 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Nkx3-2P97503 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx3-2P97503 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx3-2P97503 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx3-2P97503 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx3-2P97503 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx3-2P97503 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx3-2P97503 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Nkx3-2P97503 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx3-2P97503 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx3-2P97503 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx3-2P97503 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.26■□□□□ 0.51
Nkx3-2P97503 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx3-2P97503 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx3-2P97503 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx3-2P97503 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx3-2P97503 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx3-2P97503 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx3-2P97503 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx3-2P97503 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx3-2P97503 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.25■□□□□ 0.51
Nkx3-2P97503 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx3-2P97503 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx3-2P97503 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx3-2P97503 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx3-2P97503 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx3-2P97503 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Nkx3-2P97503 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Nkx3-2P97503 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.24■□□□□ 0.51
Nkx3-2P97503 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.24■□□□□ 0.51
Nkx3-2P97503 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx3-2P97503 Gm27405-201ENSMUST00000184201 112 ntBASIC18.24■□□□□ 0.51
Nkx3-2P97503 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.24■□□□□ 0.51
Nkx3-2P97503 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx3-2P97503 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx3-2P97503 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Nkx3-2P97503 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx3-2P97503 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx3-2P97503 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx3-2P97503 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx3-2P97503 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx3-2P97503 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Nkx3-2P97503 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx3-2P97503 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx3-2P97503 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Nkx3-2P97503 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx3-2P97503 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Nkx3-2P97503 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx3-2P97503 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx3-2P97503 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms