Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3f3aP84244 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3f3aP84244 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3f3aP84244 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
H3f3aP84244 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3f3aP84244 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
H3f3aP84244 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
H3f3aP84244 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H3f3aP84244 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
H3f3aP84244 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H3f3aP84244 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
H3f3aP84244 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
H3f3aP84244 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H3f3aP84244 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
H3f3aP84244 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.34■□□□□ 0.37
H3f3aP84244 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H3f3aP84244 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
H3f3aP84244 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
H3f3aP84244 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
H3f3aP84244 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
H3f3aP84244 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
H3f3aP84244 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.33■□□□□ 0.36
H3f3aP84244 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.33■□□□□ 0.36
H3f3aP84244 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.33■□□□□ 0.36
H3f3aP84244 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.33■□□□□ 0.36
H3f3aP84244 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
H3f3aP84244 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
H3f3aP84244 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
H3f3aP84244 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.33■□□□□ 0.36
H3f3aP84244 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
H3f3aP84244 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
H3f3aP84244 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H3f3aP84244 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
H3f3aP84244 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H3f3aP84244 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
H3f3aP84244 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
H3f3aP84244 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.32■□□□□ 0.36
H3f3aP84244 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.32■□□□□ 0.36
H3f3aP84244 Gm26833-201ENSMUST00000180899 440 ntBASIC17.32■□□□□ 0.36
H3f3aP84244 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
H3f3aP84244 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H3f3aP84244 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.32■□□□□ 0.36
H3f3aP84244 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
H3f3aP84244 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
H3f3aP84244 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H3f3aP84244 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.31■□□□□ 0.36
H3f3aP84244 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
H3f3aP84244 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
H3f3aP84244 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
H3f3aP84244 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
H3f3aP84244 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
H3f3aP84244 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.31■□□□□ 0.36
H3f3aP84244 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H3f3aP84244 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H3f3aP84244 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
H3f3aP84244 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.3■□□□□ 0.36
H3f3aP84244 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
H3f3aP84244 Gm11421-201ENSMUST00000122124 294 ntBASIC17.3■□□□□ 0.36
H3f3aP84244 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3f3aP84244 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.3■□□□□ 0.36
H3f3aP84244 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3f3aP84244 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
H3f3aP84244 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3f3aP84244 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.3■□□□□ 0.36
H3f3aP84244 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
H3f3aP84244 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
H3f3aP84244 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
H3f3aP84244 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3f3aP84244 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3f3aP84244 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
H3f3aP84244 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H3f3aP84244 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H3f3aP84244 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.29■□□□□ 0.36
H3f3aP84244 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.29■□□□□ 0.36
H3f3aP84244 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H3f3aP84244 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
H3f3aP84244 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
H3f3aP84244 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.29■□□□□ 0.36
H3f3aP84244 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
H3f3aP84244 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H3f3aP84244 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H3f3aP84244 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3f3aP84244 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3f3aP84244 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3f3aP84244 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3f3aP84244 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3f3aP84244 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3f3aP84244 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3f3aP84244 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3f3aP84244 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3f3aP84244 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3f3aP84244 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3f3aP84244 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3f3aP84244 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.28■□□□□ 0.36
H3f3aP84244 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.28■□□□□ 0.36
H3f3aP84244 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
H3f3aP84244 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3f3aP84244 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3f3aP84244 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
H3f3aP84244 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms