Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl39P62892 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl39P62892 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl39P62892 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl39P62892 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl39P62892 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl39P62892 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC13.85□□□□□ -0.19
Rpl39P62892 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl39P62892 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC13.85□□□□□ -0.19
Rpl39P62892 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl39P62892 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Rpl39P62892 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl39P62892 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl39P62892 Gm16464-201ENSMUST00000117815 1095 ntBASIC13.84□□□□□ -0.19
Rpl39P62892 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Rpl39P62892 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC13.84□□□□□ -0.19
Rpl39P62892 Gm38342-201ENSMUST00000195710 2980 ntBASIC13.84□□□□□ -0.19
Rpl39P62892 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl39P62892 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl39P62892 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl39P62892 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl39P62892 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl39P62892 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Rpl39P62892 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rpl39P62892 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl39P62892 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl39P62892 Gm5067-201ENSMUST00000170449 1009 ntBASIC13.83□□□□□ -0.2
Rpl39P62892 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC13.83□□□□□ -0.2
Rpl39P62892 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC13.83□□□□□ -0.2
Rpl39P62892 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl39P62892 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl39P62892 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl39P62892 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl39P62892 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Rpl39P62892 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Rpl39P62892 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rpl39P62892 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rpl39P62892 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC13.82□□□□□ -0.2
Rpl39P62892 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC13.82□□□□□ -0.2
Rpl39P62892 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl39P62892 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rpl39P62892 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC13.82□□□□□ -0.2
Rpl39P62892 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl39P62892 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl39P62892 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl39P62892 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Rpl39P62892 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl39P62892 AC126028.2-201ENSMUST00000228100 1833 ntBASIC13.82□□□□□ -0.2
Rpl39P62892 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Rpl39P62892 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC13.82□□□□□ -0.2
Rpl39P62892 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl39P62892 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpl39P62892 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Rpl39P62892 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Rpl39P62892 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpl39P62892 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpl39P62892 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rpl39P62892 Nsd1-203ENSMUST00000224156 1149 ntBASIC13.81□□□□□ -0.2
Rpl39P62892 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpl39P62892 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpl39P62892 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rpl39P62892 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Rpl39P62892 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpl39P62892 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Rpl39P62892 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rpl39P62892 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpl39P62892 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpl39P62892 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpl39P62892 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Rpl39P62892 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpl39P62892 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpl39P62892 Gm20100-201ENSMUST00000209418 2272 ntBASIC13.8□□□□□ -0.2
Rpl39P62892 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpl39P62892 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpl39P62892 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpl39P62892 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC13.8□□□□□ -0.2
Rpl39P62892 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rpl39P62892 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpl39P62892 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rpl39P62892 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rpl39P62892 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rpl39P62892 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpl39P62892 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Rpl39P62892 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpl39P62892 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpl39P62892 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rpl39P62892 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Rpl39P62892 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Rpl39P62892 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rpl39P62892 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpl39P62892 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Rpl39P62892 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpl39P62892 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC13.8□□□□□ -0.2
Rpl39P62892 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpl39P62892 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Rpl39P62892 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpl39P62892 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rpl39P62892 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC13.79□□□□□ -0.2
Rpl39P62892 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpl39P62892 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms