Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cks1bP61025 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cks1bP61025 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cks1bP61025 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cks1bP61025 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cks1bP61025 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cks1bP61025 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cks1bP61025 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cks1bP61025 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cks1bP61025 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cks1bP61025 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cks1bP61025 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cks1bP61025 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cks1bP61025 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cks1bP61025 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cks1bP61025 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cks1bP61025 Snhg20-203ENSMUST00000182811 2153 ntBASIC13.78□□□□□ -0.2
Cks1bP61025 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cks1bP61025 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC13.78□□□□□ -0.2
Cks1bP61025 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Cks1bP61025 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cks1bP61025 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cks1bP61025 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC13.78□□□□□ -0.2
Cks1bP61025 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cks1bP61025 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cks1bP61025 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cks1bP61025 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cks1bP61025 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cks1bP61025 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cks1bP61025 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cks1bP61025 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cks1bP61025 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cks1bP61025 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cks1bP61025 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cks1bP61025 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cks1bP61025 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Cks1bP61025 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cks1bP61025 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cks1bP61025 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cks1bP61025 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cks1bP61025 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cks1bP61025 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cks1bP61025 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Cks1bP61025 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cks1bP61025 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cks1bP61025 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cks1bP61025 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Cks1bP61025 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cks1bP61025 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC13.77□□□□□ -0.21
Cks1bP61025 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cks1bP61025 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cks1bP61025 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cks1bP61025 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Cks1bP61025 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cks1bP61025 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cks1bP61025 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cks1bP61025 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cks1bP61025 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cks1bP61025 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cks1bP61025 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cks1bP61025 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cks1bP61025 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cks1bP61025 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC13.76□□□□□ -0.21
Cks1bP61025 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cks1bP61025 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cks1bP61025 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cks1bP61025 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC13.76□□□□□ -0.21
Cks1bP61025 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cks1bP61025 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cks1bP61025 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cks1bP61025 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cks1bP61025 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cks1bP61025 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cks1bP61025 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cks1bP61025 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cks1bP61025 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cks1bP61025 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cks1bP61025 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cks1bP61025 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cks1bP61025 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cks1bP61025 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cks1bP61025 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cks1bP61025 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cks1bP61025 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC13.75□□□□□ -0.21
Cks1bP61025 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cks1bP61025 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cks1bP61025 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cks1bP61025 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cks1bP61025 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Cks1bP61025 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cks1bP61025 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cks1bP61025 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cks1bP61025 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cks1bP61025 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cks1bP61025 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cks1bP61025 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.75□□□□□ -0.21
Cks1bP61025 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cks1bP61025 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cks1bP61025 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cks1bP61025 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms