Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox3P53784 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox3P53784 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Sox3P53784 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox3P53784 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox3P53784 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox3P53784 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox3P53784 Gm42778-201ENSMUST00000199644 553 ntBASIC18.57■□□□□ 0.56
Sox3P53784 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox3P53784 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox3P53784 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox3P53784 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox3P53784 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sox3P53784 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox3P53784 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Sox3P53784 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Sox3P53784 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.56■□□□□ 0.56
Sox3P53784 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox3P53784 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox3P53784 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox3P53784 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sox3P53784 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox3P53784 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox3P53784 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sox3P53784 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox3P53784 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox3P53784 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.55■□□□□ 0.56
Sox3P53784 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Sox3P53784 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox3P53784 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox3P53784 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.55■□□□□ 0.56
Sox3P53784 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.55■□□□□ 0.56
Sox3P53784 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.55■□□□□ 0.56
Sox3P53784 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox3P53784 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Sox3P53784 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox3P53784 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Sox3P53784 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Sox3P53784 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.54■□□□□ 0.56
Sox3P53784 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox3P53784 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sox3P53784 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox3P53784 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.54■□□□□ 0.56
Sox3P53784 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.54■□□□□ 0.56
Sox3P53784 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox3P53784 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Sox3P53784 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox3P53784 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sox3P53784 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sox3P53784 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox3P53784 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox3P53784 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox3P53784 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sox3P53784 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox3P53784 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Sox3P53784 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox3P53784 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Sox3P53784 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox3P53784 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox3P53784 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.53■□□□□ 0.56
Sox3P53784 Gm10252-201ENSMUST00000209541 832 ntBASIC18.53■□□□□ 0.56
Sox3P53784 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sox3P53784 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.53■□□□□ 0.56
Sox3P53784 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox3P53784 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.53■□□□□ 0.56
Sox3P53784 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.53■□□□□ 0.56
Sox3P53784 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox3P53784 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox3P53784 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.52■□□□□ 0.56
Sox3P53784 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sox3P53784 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.52■□□□□ 0.56
Sox3P53784 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Sox3P53784 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sox3P53784 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox3P53784 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox3P53784 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox3P53784 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox3P53784 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sox3P53784 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.52■□□□□ 0.55
Sox3P53784 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox3P53784 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox3P53784 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox3P53784 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.51■□□□□ 0.55
Sox3P53784 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox3P53784 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox3P53784 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox3P53784 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.51■□□□□ 0.55
Sox3P53784 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox3P53784 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Sox3P53784 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox3P53784 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
Sox3P53784 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox3P53784 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Sox3P53784 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox3P53784 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.5■□□□□ 0.55
Sox3P53784 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox3P53784 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.5■□□□□ 0.55
Sox3P53784 Gm10653-202ENSMUST00000139570 835 ntBASIC18.5■□□□□ 0.55
Sox3P53784 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox3P53784 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms