Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.07■□□□□ 0.64
Limk1P53668 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Limk1P53668 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Limk1P53668 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Limk1P53668 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Limk1P53668 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Limk1P53668 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Limk1P53668 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Limk1P53668 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Limk1P53668 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Limk1P53668 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.06■□□□□ 0.64
Limk1P53668 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Limk1P53668 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.06■□□□□ 0.64
Limk1P53668 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.06■□□□□ 0.64
Limk1P53668 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Limk1P53668 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Limk1P53668 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Limk1P53668 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.05■□□□□ 0.64
Limk1P53668 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Limk1P53668 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.05■□□□□ 0.64
Limk1P53668 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Limk1P53668 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Limk1P53668 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Limk1P53668 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.05■□□□□ 0.64
Limk1P53668 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Limk1P53668 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Limk1P53668 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Limk1P53668 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Limk1P53668 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Limk1P53668 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Limk1P53668 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Limk1P53668 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Limk1P53668 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Limk1P53668 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Limk1P53668 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Limk1P53668 Mir6982-201ENSMUST00000184354 68 ntBASIC19.04■□□□□ 0.64
Limk1P53668 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Limk1P53668 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.04■□□□□ 0.64
Limk1P53668 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Limk1P53668 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Limk1P53668 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Limk1P53668 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.03■□□□□ 0.64
Limk1P53668 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.03■□□□□ 0.64
Limk1P53668 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Limk1P53668 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Limk1P53668 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Limk1P53668 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Limk1P53668 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Limk1P53668 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Limk1P53668 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Limk1P53668 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.03■□□□□ 0.64
Limk1P53668 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Limk1P53668 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Limk1P53668 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Limk1P53668 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Limk1P53668 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Limk1P53668 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Limk1P53668 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Limk1P53668 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Limk1P53668 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Limk1P53668 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Limk1P53668 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Limk1P53668 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.01■□□□□ 0.63
Limk1P53668 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.01■□□□□ 0.63
Limk1P53668 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.01■□□□□ 0.63
Limk1P53668 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.01■□□□□ 0.63
Limk1P53668 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.01■□□□□ 0.63
Limk1P53668 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.01■□□□□ 0.63
Limk1P53668 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.01■□□□□ 0.63
Limk1P53668 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Limk1P53668 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Limk1P53668 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Limk1P53668 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Limk1P53668 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Limk1P53668 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19■□□□□ 0.63
Limk1P53668 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19■□□□□ 0.63
Limk1P53668 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19■□□□□ 0.63
Limk1P53668 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Limk1P53668 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Limk1P53668 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Limk1P53668 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Limk1P53668 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Limk1P53668 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Limk1P53668 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Limk1P53668 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.99■□□□□ 0.63
Limk1P53668 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Limk1P53668 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Limk1P53668 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Limk1P53668 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Limk1P53668 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Limk1P53668 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Limk1P53668 Gm37856-201ENSMUST00000191634 999 ntBASIC18.98■□□□□ 0.63
Limk1P53668 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Limk1P53668 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Limk1P53668 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.98■□□□□ 0.63
Limk1P53668 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Limk1P53668 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Limk1P53668 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Limk1P53668 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Limk1P53668 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms