Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20■□□□□ 0.79
Msh2P43247 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Msh2P43247 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Msh2P43247 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Msh2P43247 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Msh2P43247 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Msh2P43247 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Msh2P43247 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Msh2P43247 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Msh2P43247 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Msh2P43247 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Msh2P43247 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Msh2P43247 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Msh2P43247 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Msh2P43247 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Msh2P43247 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.98■□□□□ 0.79
Msh2P43247 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Msh2P43247 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.98■□□□□ 0.79
Msh2P43247 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Msh2P43247 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Msh2P43247 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Msh2P43247 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.98■□□□□ 0.79
Msh2P43247 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Msh2P43247 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Msh2P43247 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Msh2P43247 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Msh2P43247 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Msh2P43247 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Msh2P43247 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Msh2P43247 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Msh2P43247 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Msh2P43247 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Msh2P43247 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Msh2P43247 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Msh2P43247 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.96■□□□□ 0.79
Msh2P43247 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.96■□□□□ 0.79
Msh2P43247 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Msh2P43247 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Msh2P43247 Gm13241-201ENSMUST00000094493 780 ntBASIC19.96■□□□□ 0.79
Msh2P43247 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Msh2P43247 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Msh2P43247 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Msh2P43247 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Msh2P43247 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Msh2P43247 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Msh2P43247 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Msh2P43247 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Msh2P43247 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Msh2P43247 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.95■□□□□ 0.78
Msh2P43247 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Msh2P43247 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Msh2P43247 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Msh2P43247 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Msh2P43247 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Msh2P43247 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Msh2P43247 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Msh2P43247 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Msh2P43247 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.94■□□□□ 0.78
Msh2P43247 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Msh2P43247 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Msh2P43247 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Msh2P43247 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh2P43247 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh2P43247 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh2P43247 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh2P43247 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.93■□□□□ 0.78
Msh2P43247 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh2P43247 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Msh2P43247 Gm43530-201ENSMUST00000195920 274 ntBASIC19.93■□□□□ 0.78
Msh2P43247 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.93■□□□□ 0.78
Msh2P43247 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh2P43247 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Msh2P43247 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Msh2P43247 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh2P43247 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh2P43247 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh2P43247 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh2P43247 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.92■□□□□ 0.78
Msh2P43247 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Msh2P43247 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Msh2P43247 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Msh2P43247 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Msh2P43247 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.92■□□□□ 0.78
Msh2P43247 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Msh2P43247 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.92■□□□□ 0.78
Msh2P43247 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.92■□□□□ 0.78
Msh2P43247 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Msh2P43247 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Msh2P43247 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Msh2P43247 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Msh2P43247 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Msh2P43247 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Msh2P43247 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.91■□□□□ 0.78
Msh2P43247 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Msh2P43247 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Msh2P43247 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.91■□□□□ 0.78
Msh2P43247 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Msh2P43247 Gm21956-201ENSMUST00000179946 522 ntBASIC19.91■□□□□ 0.78
Msh2P43247 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Msh2P43247 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms