Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 AA386476-201ENSMUST00000098781 1665 ntBASIC18.59■□□□□ 0.57
Cdx2P43241 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cdx2P43241 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdx2P43241 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cdx2P43241 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdx2P43241 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cdx2P43241 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdx2P43241 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Cdx2P43241 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdx2P43241 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdx2P43241 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cdx2P43241 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdx2P43241 Gm13168-201ENSMUST00000121771 632 ntBASIC18.58■□□□□ 0.56
Cdx2P43241 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.58■□□□□ 0.56
Cdx2P43241 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdx2P43241 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdx2P43241 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdx2P43241 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdx2P43241 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.57■□□□□ 0.56
Cdx2P43241 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdx2P43241 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cdx2P43241 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdx2P43241 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdx2P43241 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdx2P43241 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdx2P43241 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdx2P43241 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.57■□□□□ 0.56
Cdx2P43241 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cdx2P43241 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cdx2P43241 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdx2P43241 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdx2P43241 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cdx2P43241 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdx2P43241 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdx2P43241 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
Cdx2P43241 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdx2P43241 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdx2P43241 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cdx2P43241 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cdx2P43241 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cdx2P43241 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdx2P43241 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdx2P43241 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Cdx2P43241 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cdx2P43241 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdx2P43241 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.55■□□□□ 0.56
Cdx2P43241 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdx2P43241 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.55■□□□□ 0.56
Cdx2P43241 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdx2P43241 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdx2P43241 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdx2P43241 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdx2P43241 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdx2P43241 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cdx2P43241 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.54■□□□□ 0.56
Cdx2P43241 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.54■□□□□ 0.56
Cdx2P43241 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cdx2P43241 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Cdx2P43241 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.54■□□□□ 0.56
Cdx2P43241 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdx2P43241 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdx2P43241 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdx2P43241 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Cdx2P43241 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdx2P43241 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdx2P43241 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdx2P43241 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.53■□□□□ 0.56
Cdx2P43241 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdx2P43241 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdx2P43241 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.53■□□□□ 0.56
Cdx2P43241 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdx2P43241 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdx2P43241 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdx2P43241 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cdx2P43241 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.52■□□□□ 0.56
Cdx2P43241 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.52■□□□□ 0.56
Cdx2P43241 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdx2P43241 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdx2P43241 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdx2P43241 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.52■□□□□ 0.56
Cdx2P43241 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Cdx2P43241 Gm37856-201ENSMUST00000191634 999 ntBASIC18.52■□□□□ 0.56
Cdx2P43241 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.52■□□□□ 0.56
Cdx2P43241 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdx2P43241 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Cdx2P43241 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdx2P43241 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.52■□□□□ 0.56
Cdx2P43241 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Cdx2P43241 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdx2P43241 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdx2P43241 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
Cdx2P43241 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdx2P43241 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdx2P43241 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdx2P43241 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdx2P43241 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdx2P43241 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Cdx2P43241 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdx2P43241 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
Cdx2P43241 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms